KEGG   Setaria viridis (green foxtail): 117849798
Entry
117849798         CDS       T07951                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117849798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117849798
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     117849798
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box HK
Other DBs
NCBI-GeneID: 117849798
NCBI-ProteinID: XP_034587382
LinkDB
Position
3:complement(18674470..18678996)
AA seq 369 aa
MVSGRPVSGELDAWFESLMVSSGSQRGHAESGGPLPTLSGWKDLPVELLLRILSTIGDDR
MVIVASGVCTGWRDALGWGVTRLSLSWCKLNMNNLMISLAPKFTKLQVLTLRQNKPQLED
SAVEAVANYCHDLRELDLSRSFRLSDRSLYALAHGCPWLTRLNISGCSNFSDTALTYLTC
RCKNLKCLNLCGCVKAASDRALQAIAQNCGQLQSLNLGWCDDVTDKGVTSLASGCPDLRA
VDLCGCILITDESVVALANGCPHLRSLGLYFCQNITDRAMYSLANSCMKSKRRRWDAVKD
GLANLNISQCTALTPPAVQAVCDSFPALHTCPERHSLIISGCLSLTSVHCACALHPHRAG
RALMLNHAY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggtcagcgggaggcctgtgagcggtgaattggatgcgtggttcgagagcctcatggta
tcctcaggcagccagagggggcacgctgaaagtggtggcccattgccgacattatcagga
tggaaggaccttccagtggagctactgttgaggatattatcaactattggagatgatagg
atggtcatcgtggcatctggtgtttgcacaggctggcgtgatgccctgggatggggggtc
actaggctttccctctcatggtgcaagctgaacatgaataatttaatgatatctcttgct
cccaagtttacaaagttgcaagttctcactcttcggcaaaacaaacctcagcttgaagac
agtgcagtagaggctgttgccaactactgtcatgatctccgagagttagacctcagcaga
agcttcaggcttagtgaccgctccttgtatgcattggcccatggatgcccgtggcttaca
agattgaacattagtggatgttccaatttcagtgatactgccttgacttaccttacttgt
cgctgtaaaaacctgaagtgcttgaatttgtgtggatgtgtgaaggctgctagtgatagg
gctttgcaggccattgctcagaactgtgggcagctgcaatctctgaacttaggctggtgc
gacgatgttacagataagggagtgaccagcttagcgtcagggtgtcccgatctcagagct
gtagacttgtgtggttgcattcttataacagatgagagtgtggttgctcttgccaacgga
tgtccacacctgcgatctttaggtctttacttctgccagaatatcacggaccgtgcaatg
tactccctcgcaaacagctgcatgaagagcaagcgcaggaggtgggacgccgtgaaagac
gggctcgcgaacctcaacattagccagtgcacagccctgacgcccccagcggtgcaggcg
gtctgcgactccttcccagcactccacacctgcccggagaggcactccctcatcatcagc
ggctgcctcagcctcacttcggtccactgcgcctgcgccctgcaccctcaccgcgcaggg
cgagccctgatgcttaaccatgcgtactga

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