Setaria viridis (green foxtail): 117849798
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Entry
117849798 CDS
T07951
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117849798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117849798
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117849798
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GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
HK
Motif
Other DBs
NCBI-GeneID:
117849798
NCBI-ProteinID:
XP_034587382
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Position
3:complement(18674470..18678996)
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AA seq
369 aa
AA seq
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MVSGRPVSGELDAWFESLMVSSGSQRGHAESGGPLPTLSGWKDLPVELLLRILSTIGDDR
MVIVASGVCTGWRDALGWGVTRLSLSWCKLNMNNLMISLAPKFTKLQVLTLRQNKPQLED
SAVEAVANYCHDLRELDLSRSFRLSDRSLYALAHGCPWLTRLNISGCSNFSDTALTYLTC
RCKNLKCLNLCGCVKAASDRALQAIAQNCGQLQSLNLGWCDDVTDKGVTSLASGCPDLRA
VDLCGCILITDESVVALANGCPHLRSLGLYFCQNITDRAMYSLANSCMKSKRRRWDAVKD
GLANLNISQCTALTPPAVQAVCDSFPALHTCPERHSLIISGCLSLTSVHCACALHPHRAG
RALMLNHAY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgggaggcctgtgagcggtgaattggatgcgtggttcgagagcctcatggta
tcctcaggcagccagagggggcacgctgaaagtggtggcccattgccgacattatcagga
tggaaggaccttccagtggagctactgttgaggatattatcaactattggagatgatagg
atggtcatcgtggcatctggtgtttgcacaggctggcgtgatgccctgggatggggggtc
actaggctttccctctcatggtgcaagctgaacatgaataatttaatgatatctcttgct
cccaagtttacaaagttgcaagttctcactcttcggcaaaacaaacctcagcttgaagac
agtgcagtagaggctgttgccaactactgtcatgatctccgagagttagacctcagcaga
agcttcaggcttagtgaccgctccttgtatgcattggcccatggatgcccgtggcttaca
agattgaacattagtggatgttccaatttcagtgatactgccttgacttaccttacttgt
cgctgtaaaaacctgaagtgcttgaatttgtgtggatgtgtgaaggctgctagtgatagg
gctttgcaggccattgctcagaactgtgggcagctgcaatctctgaacttaggctggtgc
gacgatgttacagataagggagtgaccagcttagcgtcagggtgtcccgatctcagagct
gtagacttgtgtggttgcattcttataacagatgagagtgtggttgctcttgccaacgga
tgtccacacctgcgatctttaggtctttacttctgccagaatatcacggaccgtgcaatg
tactccctcgcaaacagctgcatgaagagcaagcgcaggaggtgggacgccgtgaaagac
gggctcgcgaacctcaacattagccagtgcacagccctgacgcccccagcggtgcaggcg
gtctgcgactccttcccagcactccacacctgcccggagaggcactccctcatcatcagc
ggctgcctcagcctcacttcggtccactgcgcctgcgccctgcaccctcaccgcgcaggg
cgagccctgatgcttaaccatgcgtactga
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integrated database retrieval system