Setaria viridis (green foxtail): 117849979
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Entry
117849979 CDS
T07951
Name
(RefSeq) probable histone H2AXb
KO
K11251
histone H2A
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117849979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117849979
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117849979
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
117849979
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117849979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
117849979
NCBI-ProteinID:
XP_034587633
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Position
3:44166977..44167855
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AA seq
136 aa
AA seq
DB search
MSSSGGRGKPKGTKAVSRSSKAGLQFPVGRVARYLKTGKYAERVGGGAPVYLSAVLEYLA
AEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIAAGGVLPNIHQTLLPKK
AGGKGKADIGSASQEF
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgagttccagcggcggcaggggcaagcccaagggcaccaaggcggtgtcgcggtcgtcc
aaggccggcctgcagttccccgtcggccgcgtcgcgcgctacctcaagacgggcaagtac
gccgagcgcgtcggcgggggagcccccgtctacctctccgccgtcctagagtacctcgcc
gccgaggtgctggagctcgccggcaacgcggcgcgcgacaacaagaagaaccggatcgtg
ccgcgccacatccagctcgccgtgcgcaacgacgaggagctcagcaagctgctgggggcc
gtcaccatcgccgccggaggggtgctgccaaacatccaccagacgctgctgcccaagaag
gccggcggcaagggcaaggccgacatcggatctgcctcccaggagttctag
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