Setaria viridis (green foxtail): 117849988
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Entry
117849988 CDS
T07951
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117849988
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117849988
Enzymes [BR:
svs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117849988
Protein phosphatases and associated proteins [BR:
svs01009
]
HAD phosphatases
Fcp/Scp phosphatases
117849988
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117849988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
117849988
NCBI-ProteinID:
XP_034587641
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Position
3:complement(21168936..21174712)
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AA seq
543 aa
AA seq
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MSLAEAPSPSPSSSSGSDDFAALLDSELELASGADSAFPGDPSSASPDTDDEGEDEDSEE
VEVELLEQNSAKRRRVEEQSQDQGTSIRPDKIATGPSKNVQVEVCPHPGYFGGLCFRCGK
PQDEEDASGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINSTKLQ
DISSAENELGIRTAALKDDPDRSIFSLDSMQMLTKLRPFVRNFLKEASNMFEMYIYTMGD
KAYAIEIAKLLDPSNVYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVWQKHK
ENLILMERYHYFASSCRQFGFGVKSLSESMQDERESDGALATVLDVLKRIHTIFFDTAVE
TALSSRDVRQVIKTVRKEVLEGCKLVFSRVFPNTSRPQEQMMWKMAEHLGAVCSTDVDST
VTHVVAVDLGTEKARWAVKNKKFLVHPRWIEAANFRWHRQPEEDFPVIPPKEKSTDKEPS
KDKEENAVAGQKETSNDKKEENAVAGQKETSNDQEDNDVAGQKEKDGAKENAVATTATGP
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NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgccgaggcgccgtcgccgtccccgtcgtcgtcgagcggaagcgacgacttc
gccgccctcctcgactccgagctcgagctcgcctccggcgccgactccgccttccctggc
gacccctcctccgcctcgcccgataccgacgacgagggcgaggatgaggattcggaggag
gtggaagttgaactcctagaacagaacagtgctaaaaggcgtagagtggaggaacagagc
caagatcaaggaacatcaattaggcctgacaaaattgccactggcccatctaaaaatgtt
caagttgaggtatgtccacatcctggatattttggggggctttgctttagatgtggcaag
ccacaagatgaagaagatgcttcaggagttgcttttggttacatccacaagggcttgagg
ctaggtacttcagaaattgacagattacgtggcgctgatttgaagaatctgctgcgtgaa
agaaaactagtgcttattttagacctggatcatacactgatcaactcgaccaaactccaa
gatatttcttctgctgagaatgagttgggtattcggactgctgctttaaaagatgatccg
gacagaagcatcttctcactagattcaatgcagatgctcacgaagttgagaccatttgtt
cgtaattttttgaaagaagcaagcaatatgtttgagatgtatatatacaccatgggtgac
aaagcttatgcaattgaaatagcgaagcttcttgaccctagtaatgtctattttccttca
aaagtgatttcgaactcagattgcacccagcgccaccagaaaggtcttgatgtgattctt
ggggctgaaagtgttgcagtgattcttgatgacactgaatatgtctggcagaagcataaa
gagaacctgattctgatggagagatatcattactttgcttcaagctgccgccaatttggt
tttggtgttaaatctttgtcagagtcgatgcaggatgaaagggagagtgatggtgctttg
gccaccgttttagatgtattgaagcgcatacacacaattttctttgacacggctgttgaa
actgctctttcttcacgggatgtaagacaggtgatcaagacagtacgaaaggaagtcctg
gaaggctgcaaacttgtcttcagtcgggtgttcccaaatacctctcgcccacaggagcag
atgatgtggaagatggccgagcatctgggcgctgtttgctccacagatgtagattccaca
gtgacccacgttgtggctgtggatctgggaacagaaaaggcccgctgggctgtaaagaac
aagaagtttttggtccacccacgctggatcgaagccgccaatttccggtggcaccggcaa
ccggaggaagattttcctgtcattccaccgaaggaaaagagcacagataaggaaccgagc
aaagataaagaagaaaatgctgtagcaggccagaaggaaacgagcaacgataaaaaagaa
gaaaatgctgtagctggtcagaaggaaacgagcaacgatcaagaggacaatgatgtagcc
ggccagaaggagaaggatggcgccaaagaaaacgctgtggccactactgctacaggccct
gctgactcataa
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