Setaria viridis (green foxtail): 117850080
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Entry
117850080 CDS
T07951
Name
(RefSeq) KH domain-containing protein At1g09660/At1g09670 isoform X1
KO
K14945
protein quaking
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117850080
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117850080
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
117850080
NCBI-ProteinID:
XP_034587757
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Position
3:19135427..19139587
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AA seq
290 aa
AA seq
DB search
MDERIPPPPFFQHSPSGVHSSPHRHNPMWSSSSDRERYLAELLAERQKLAPFVQVLPFCT
RLLNQEILRASSLPPNQNFIEPERIDHGSPLRLAGQSMNGQAMDLDGWSGMQTEHLGVLQ
SPSMVWNGTPGVVGSPVVKKVVRIDVPVDKYPNYNFVGRLLGPRGNSLKRVEATTQCRVY
IRGRGSVKDSVKEDKLRDKPGYEHLNDPLHVLVEAEFPADSVDARLNQAVAILEDLLKPV
DESMDYYKKQQLRELAILNGTLREESPSSHLSPSVSPFNSTGMKRAKTGR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaggatcccaccgccccctttcttccagcactcaccatccggtgtccattct
tcccctcatcgccacaaccccatgtggtcttcttcctctgatagggagagataccttgct
gaattacttgctgagaggcagaaattagcgccgttcgtgcaagttcttccattttgtacc
aggcttctaaatcaagaaattttgcgggcatcttcgttgccacctaaccaaaattttatt
gaacctgagagaattgatcatggtagtcccttaagattagctggccaatctatgaatggt
caagccatggatctagatggatggtcgggaatgcaaacagagcatttaggagtactccaa
tccccatccatggtatggaatggtactccgggagttgttggcagccctgttgtgaaaaag
gttgtcaggatcgatgttccagttgacaagtatcccaattacaactttgttggccgttta
ttggggccacgaggaaactcgctcaaaagagttgaagctacgacccaatgtagagtatat
attcgtggacggggttcagtgaaagattctgttaaggaagacaagctgagagacaagcct
ggctatgagcacttaaatgatccactgcatgtgcttgtggaagctgagttcccagcagat
agtgtcgatgcccgactaaaccaagctgtggccatattggaggatcttctcaaaccagtt
gatgagtccatggactactacaagaagcaacagctgagggaattggctatacttaatggc
actctaagggaggaaagcccaagctcccatcttagtcccagtgtatcccccttcaattct
accgggatgaagcgcgcaaagacagggcggtga
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