Setaria viridis (green foxtail): 117850089
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Entry
117850089 CDS
T07951
Name
(RefSeq) ribulose bisphosphate carboxylase small subunit, chloroplastic
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00630
Glyoxylate and dicarboxylate metabolism
svs00710
Carbon fixation by Calvin cycle
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
Module
svs_M00165
Reductive pentose phosphate cycle (Calvin cycle)
svs_M00532
Photorespiration
svs_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117850089
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
117850089
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
117850089
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Motif
Pfam:
RuBisCO_small
RbcS
Motif
Other DBs
NCBI-GeneID:
117850089
NCBI-ProteinID:
XP_034587772
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Position
3:34926150..34927169
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AA seq
169 aa
AA seq
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MAPTAMAAATSVAPFQGLKSTARLPVSRRSSSSGFGNVSNGGRIRCMQVWPAEGNKKFET
LSYLPPLSTDEVLKQIDYLIRKNWIPCLEFSKIGFVYRENSTSPCYYDGRYWTMWKLPMF
GCTEATQVYAEFEECKKAYPDCYIRIIGFDNIKQVQCVMFIAYKPPGSE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaccgcgatggccgccgccacctccgtcgctccattccaggggctcaagtcc
accgccagactccccgtcagccgccgctccagcagctccggcttcggcaacgtcagcaac
ggcggaaggatcaggtgcatgcaggtgtggccggcggagggcaacaagaagttcgagacc
ctctcctacctgccacctctctccacggacgaggtcctaaagcagatcgactacctgatc
cggaagaactggattccctgcctcgagttcagcaagatcgggttcgtctatcgtgagaac
agcacgtctccctgttactacgacgggcgctactggaccatgtggaagctgcccatgttc
ggctgcaccgaggccacccaggtgtacgctgagttcgaggagtgcaagaaggcctacccc
gactgttacatccgtatcatcggcttcgacaacatcaagcaggtgcagtgcgtcatgttc
atcgcctacaagcccccaggctccgagtaa
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