Setaria viridis (green foxtail): 117850171
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Entry
117850171 CDS
T07951
Name
(RefSeq) probable galacturonosyltransferase 7
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00520
Amino sugar and nucleotide sugar metabolism
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117850171
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117850171
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
117850171
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117850171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
117850171
NCBI-ProteinID:
XP_034587867
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Position
3:14868583..14873976
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AA seq
627 aa
AA seq
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MKGPGPAAAPAAPAGKKRWRCVAAAGAAVALAFFSVVVPLAVLLGLHARFPSMYLVDESV
VSVYDGSEGGSWEPIPSKGNDSLQVNNTVKELVPPPSKERTETNGSQSDTVIGNISIRPA
PPIRQATVLENSSLPYVTDTDLGSFEQGLPGDENGKSCQLQFGSYCLWSVEHKEVMKDFI
VKRLKDQLFVARAYYPSIVKLDGMEKLSLEMKQNIQEHGHMLSEAISDADLPEFHGVNMA
KMDQTIAAAKSCALECTNVEKKLTQLLDMTEDEALFHARQSTYLYRLGVQTLPKSLHCLS
MRLTVDYFNASADMEHSDAKKFENPAFQHYIIFSTNLLASSMTINSSVTNSEESANMVFH
LMTDAQNFYAFKNWFIRNSYKGATIRVLNFEDFQVKNSGNGIVEELSPSEEFRITSNGNA
LTLNTLTRTEYISMFGHSLFLLPELFSNLKRVIVLEDDTIVQKDLSLLWNLDLKGKVIGA
VQFCRVKFRQLRAYLPDLPYDSGSCIWMSGVSIIDLDEWREHDVTGIHRRILQKLRHDTE
ATWRSAALPAGLLAFQDLIHPIEGQWVQFGLGHDYGLTHGAIKKAAILHYNGNMKPWLEL
GIRRYRKYWKRYLPRDDVFMMGCNVNP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcccgggaccggcggccgcccccgcggccccggcggggaagaagcggtggcgg
tgcgtggcggcggctggcgccgcggtggcgctggccttcttctccgtcgtcgtgcccctc
gccgtgctcctcggcctccacgcgcgcttcccctcgatgtacctggtcgacgagagcgtg
gtgtcggtttatgatggcagcgagggcggtagttgggagccgattccgtcgaagggaaat
gacagtttgcaggtcaacaataccgtgaaggagctggtgccgcctccttcgaaggagcgg
accgaaacaaatggcagtcaatccgacacggttattggcaatatctcaatccgtccagct
cctcccatccgacaagccacagtgttggaaaattcttcgttgccctatgttaccgacact
gatctgggcagttttgagcaaggtttacctggtgatgagaatggaaaatcctgccagctt
cagtttggaagctattgtctttggtctgtagaacataaggaagtcatgaaagattttata
gtgaagagacttaaagatcagctctttgttgcgagagcttactatccaagcattgtgaaa
cttgatggaatggaaaagctttcacttgaaatgaaacaaaacatccaagaacatgggcat
atgcttagtgaagccatatctgatgctgatcttcctgaatttcatggagtcaatatggcc
aagatggatcagacaatcgctgcagcaaaatcatgtgccttagaatgcaccaatgttgag
aaaaagctgacacagttgcttgatatgactgaagatgaagctctttttcatgcaagacag
agcacctatctttacaggcttggagttcagacattacccaagagcctccactgcctttca
atgagattgactgttgactacttcaatgcctcagctgacatggagcattcagatgcaaaa
aagtttgaaaatccagcattccagcactatatcattttctccaccaaccttcttgcgtca
tccatgactatcaactcaagcgtgacaaattctgaggaatcagcaaatatggttttccat
ctgatgactgatgcacaaaacttttatgcatttaagaactggttcatcagaaattcttac
aagggagctaccataagagtccttaattttgaagatttccaagtcaagaattcgggtaat
gggatagttgaagaattatcaccatctgaggagttccgaatcacctccaatggcaatgct
ctaacgttaaacacacttacgaggactgaatatatctcaatgttcgggcactcccttttc
ttgcttcctgaattatttagcaatcttaaaagggtcattgtcttggaagacgacactata
gtccagaaagatttgtcgctcctgtggaaccttgacttaaaaggaaaagtgattggtgct
gtccagttttgtcgagttaaattccgtcagctcagagcatacttgcctgacttaccctat
gattctggttcatgcatctggatgtctggagtgagcattattgatctcgatgaatggagg
gaacatgatgtcactggaattcatcgccgaatactacagaagctgcgacatgacacagaa
gctacctggagatctgcagcactacctgcaggcctgcttgcttttcaagatctgatccat
cctattgaaggccagtgggtccaattcgggcttggccatgactatggactcactcatggt
gctataaagaaagctgccatattgcactacaacggtaacatgaaaccctggctagagctt
ggaatacgtcggtacagaaaatactggaagcggtacctgccaagagatgatgtatttatg
atgggttgtaatgtgaacccatga
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