Setaria viridis (green foxtail): 117850378
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Entry
117850378 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K12846
U4/U6.U5 tri-snRNP-associated protein 3
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117850378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117850378
Spliceosome [BR:
svs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
117850378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNRNP27
Presenilin
Motif
Other DBs
NCBI-GeneID:
117850378
NCBI-ProteinID:
XP_072149007
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All DBs
Position
1:complement(21012984..21016705)
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AA seq
233 aa
AA seq
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MVHSALEARNRPGPSREQKPRENSKPYLLSSPRLLAGEMSDRRRDKEKPRDRDRDKDRDL
DRHRDRDRDRNRDRDKDRDRDRRRDRERKRSRSRSPSADRDRSHRRHSHSHRGRSSPSPD
AGRHKRRRDASPAAADHHHREDKKSADPPAAPKGGGDPAAAAAAAAAGDGDVDAEELEMM
KMMGIPVGFDSTKGKHVPDADVSGVRVVTKRQPRQYMNRRGGFNRPLPPERNR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggtacactctgctttggaagctcgaaatcggcccggccctagtagagaacaaaagccc
cgagaaaacagcaaaccctacctcctctcctctccccgcctcctcgccggcgaaatgtcc
gaccgccgccgcgacaaggaaaagccccgcgaccgcgaccgtgacaaggaccgcgacctc
gatcgccatcgcgaccgggatcgcgacaggaacagggacagggataaggatcgcgaccgc
gaccgccgccgcgaccgcgagcggaagcgctcccggtcccgttccccgtcagccgaccgg
gaccgctcccaccgccgccactcccactcccaccgaggccgctcgtcaccctcccccgac
gctggccgtcacaagcgccgccgcgacgcgtcccccgccgccgccgaccaccaccacagg
gaggacaagaagtccgccgatcctcccgcggcacccaagggcggaggggacccggcggcc
gcggccgcggccgcggcggcgggcgacggggacgtggatgcggaggagctcgagatgatg
aagatgatgggcatccccgtcgggttcgactccaccaaggggaagcacgtgcctgacgcc
gacgtcagcggagtgcgcgtcgtcaccaagcgccagccgcgccagtacatgaaccgccgc
ggcgggttcaaccggcccctgccgcccgagcgcaaccgctaa
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