KEGG   Setaria viridis (green foxtail): 117850542
Entry
117850542         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117850542
Enzymes [BR:svs01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117850542
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117850542
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-C3HC4_4 RING_XB3-XBAT31 Prok-RING_4 zf-RING_10 zf-rbx1 Zn_ribbon_6 Rtf2 U-box Sina_RING zf-Nse zf-RING_4 TRAF3_RING zf-RING_11 zf-RING_6 DZR
Other DBs
NCBI-GeneID: 117850542
NCBI-ProteinID: XP_034588283
LinkDB
Position
3:396846..400020
AA seq 194 aa
MSTVSSTRRAPRRLSQDGSADKVVVNLEASSPVVGSSLSFPVAGSRRGVSATVAGAQNSP
IDVEAIEDEVQAISPSRVPPPRNRRTRRQPVTVVDLEVEGSQQGNKRQRVVHCLSQNRGE
GSSFQANKEVPKEPTFTCPICWNKMWEPATTPCGHIFCNTCIKQAIKIQKKCPTCRKGLR
ATSVHRIYLPSTAS
NT seq 585 nt   +upstreamnt  +downstreamnt
atgagcactgtcagcagcacaaggcgtgcgccgaggagactgtcgcaagatgggtctgct
gataaagtagtggtgaacttggaagcaagctccccagtggtgggaagttcactgagcttc
ccggtggcaggaagccgtcggggagtatcagccactgttgctggcgcacaaaactcacct
attgatgtggaagccattgaagatgaagtgcaggcaatatcgccatcacgagtaccccct
ccaagaaacaggagaaccaggaggcaacctgtaacagtggttgacttggaggtagagggt
agccagcaagggaacaagcgccaaagggttgtacattgcctctctcaaaataggggagaa
gggtccagctttcaggcaaataaggaggtccccaaggaaccaacttttacctgcccgata
tgttggaataagatgtgggagcccgccacaacaccttgtggccatatcttctgcaacacg
tgcattaagcaagccatcaagattcagaagaaatgtcctacgtgcaggaagggcctgaga
gcaactagcgtccatcgtatttatcttccaagcaccgctagttaa

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