Setaria viridis (green foxtail): 117850612
Help
Entry
117850612 CDS
T07951
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117850612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117850612
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117850612
Prokaryotic type
Archaeal type
TFB
117850612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
Ribosomal_S27e
Zn_ribbon_9
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
117850612
NCBI-ProteinID:
XP_034588364
LinkDB
All DBs
Position
3:11306314..11307845
Genome browser
AA seq
310 aa
AA seq
DB search
MGGAADDLIFCPDCHRRTEVVLDHATGDTICTECALVLDAHYVDEGSEWRNFADDGGGED
RDPSRVGGASDPFLNNAPLDTRIVFNGPQKTQADGGHALPRMRINTGPDPEQSLVEAFRA
ITDMADRLGLVATIRDRAKDVYRKMDEAKACPRGKKRDQFYAACLFVACRNEGKPRTYKE
LATATSGGATAKKEVGRMTTLIKKVLGEEAGQVMDIGVVHAADYMRRFCSRLGMGNQEMR
AAQEAARRLDDTLDVRRNPESIAAAISYMVVQRAGASKTVKDVSMATGVAEATIKEAHKD
LTPHVELLFA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgccgcggacgatctgatcttctgcccggactgccaccgccggacggaggtg
gtgctggaccacgccaccggcgacaccatctgcaccgagtgcgcgctcgtcctcgacgcg
cactacgtcgacgagggcagcgagtggcgcaacttcgccgacgacggcggcggcgaggac
cgcgaccccagccgcgtcggcggggccagcgaccccttcctcaacaacgcccctctcgac
acccgcatcgtcttcaacggcccgcagaagacgcaggccgatggcggccacgcgctgccg
aggatgcggatcaacaccgggccggaccccgagcagtcgctggtcgaggcgttccgcgcc
atcaccgacatggccgaccgcctcggcctcgtcgccaccatcagggaccgcgccaaggac
gtgtacaggaagatggacgaggccaaggcgtgccccaggggcaagaagcgggaccagttc
tacgccgcctgcctcttcgtggcgtgccgcaacgagggcaagccgcggacgtacaaggag
ctggccacggcgacgagcggcggggccaccgcgaagaaggaggtcggcaggatgaccacg
ctcatcaagaaggtgctcggggaggaggccgggcaggtgatggacatcggcgtcgtgcac
gccgccgactacatgcgccgcttctgctcccggctcgggatgggcaaccaggagatgcgc
gccgcgcaggaggcggcgcggaggctggacgacaccctcgacgtgcggcgcaaccccgag
tccatcgcggccgccatcagctacatggtcgtgcagcgcgccggcgccagcaagaccgtc
aaggatgtgtccatggccaccggcgtcgccgaggccaccatcaaggaggcgcacaaggac
cttaccccgcacgtcgagctgcttttcgcctag
DBGET
integrated database retrieval system
