Setaria viridis (green foxtail): 117850636
Help
Entry
117850636 CDS
T07951
Name
(RefSeq) DNA repair protein RAD51 homolog B isoform X1
KO
K04482
DNA repair protein RAD51
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03440
Homologous recombination
svs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117850636
03460 Fanconi anemia pathway
117850636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117850636
04121 Ubiquitin system [BR:
svs04121
]
117850636
03400 DNA repair and recombination proteins [BR:
svs03400
]
117850636
Membrane trafficking [BR:
svs04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117850636
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117850636
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
117850636
RecA family proteins
117850636
FA (Fanconi anemia) pathway
Other FA pathway factors
117850636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
HHH_5
AAA_25
ATPase
AAA_22
DnaB_C
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
117850636
NCBI-ProteinID:
XP_034588384
LinkDB
All DBs
Position
3:complement(45678168..45682258)
Genome browser
AA seq
349 aa
AA seq
DB search
MSSSAAHQKAAAAAPAEEEAVDHGPLPIEQLQTSGIAALDVKKLKDAGLCTVESVAYSPR
KDLLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHALRLEIIQITTGSRELDQILDVMF
SISTGGIETGSITEIYGEFRSGKTQLSHTLCVTCQLPLDQGGGEGKALYIDAEGKFRPQR
LLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMVVDSATALYRT
DFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGAAMFAGPQIKPIGGN
IMAHASTTRLFLRKGRGEERICKVVSSPCLAEAEARFQISSEGVTDVKD
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtccgcggcgcatcagaaggccgctgcggcggcgccggcggaggaggaggcg
gtggatcacggtcccttgcccatcgagcagctacagacttctggaatagctgcacttgat
gtgaaaaagctcaaagatgctggtctctgcaccgtggaatctgtagcttactctccgagg
aaagatcttttgcaaattaaagggattagtgaagccaaagtcgacaagataattgaagcg
gcttccaagttggttccactaggatttactagtgctagccaacttcatgcgctgaggctt
gagatcatccagattacaactggatcaagagagcttgatcaaattttggatgttatgttt
tcaatttcaacaggaggaatagaaactgggtctatcacagagatctatggtgaatttcgc
tctgggaagactcagctgtcccacactctctgtgtcacatgtcagctcccactggatcaa
ggtggtggtgaaggaaaagctttgtatattgatgcagagggcaagttcaggccacaaaga
cttctccagatagcagacaggtttggcttgaatggtgctgatgtactggagaatgtggct
tatgccagagcatataacactgatcatcaatcaagacttttgctggaggcagcttccatg
atggtggagaccaggtttgctcttatggttgtggatagtgccacagccctatacagaact
gatttctctggtagaggagagctatcagcaagacagatgcacctggctaagtttcttagg
agccttcagaagttagcagatgagtttggagtggcagtggtaatcactaaccaagtagtg
gctcaagtggatggtgctgcaatgtttgctgggccacaaatcaaacccattggagggaac
atcatggctcatgcttccacgactaggctctttcttcgcaaggggagaggggaggagcgg
atctgtaaagtagtaagctctccctgtctagctgaagctgaagcaaggtttcagatatca
tccgagggtgtcactgatgtcaaggactga
DBGET
integrated database retrieval system
