Setaria viridis (green foxtail): 117850681
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Entry
117850681 CDS
T07951
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117850681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117850681
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117850681
Prokaryotic type
Archaeal type
TFB
117850681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cyclin_N
Ribosomal_S27e
DUF7573
Motif
Other DBs
NCBI-GeneID:
117850681
NCBI-ProteinID:
XP_034588433
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All DBs
Position
3:11309867..11311650
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AA seq
309 aa
AA seq
DB search
MAEESLYCPDCHRSTEVVLDHATGDTVCTECALVLEAHYIDEGSEWRNFADDGGGEDRDP
SRVGGPNDPFLSNAPLVTRIAYSGPQKAQADGGHALPRMRVNVGGADPEQSLVEAFQAIA
DMADRLGLVATIRDGAKDVYKKLDEAKACPRGKKRDVFYAACLYIACRNDGKPRTYKELA
TVTRAGASAKKEIGRMTTLIKKVLGEEAGQQVLDIGVVSATDYLRRFCSRLGMGNQEMRA
AQEAARRLEAGLDVRRNPESIAAAISYMVVQRAGASKTAKDVSMATGVAEVTIKEAHKDL
APHAEMLFA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagtcgctctactgcccggactgccaccgctccacggaggttgttctggac
cacgccaccggcgacaccgtgtgcaccgagtgcgcgctcgtcctcgaggcgcactacatc
gacgagggctccgagtggcgcaacttcgccgacgacggcggcggcgaggaccgcgacccc
agccgcgtcggcgggcccaacgaccccttcctctccaacgcgccgctcgtcacccgcatc
gcctactccggcccgcagaaggcgcaggccgatggcggccacgcgctgccgaggatgcgg
gtcaacgtcggcggggcggaccccgagcagtcgctggtcgaggcgttccaggccatcgcc
gacatggccgaccgcctcggcctcgtcgccaccatcagggacggcgccaaggacgtgtac
aagaagctggacgaggccaaggcatgcccccgggggaagaagcgggacgttttctacgcc
gcctgcctctacatcgcgtgccgcaacgacggcaagccgcgcacgtacaaggagctcgcc
acggtgacgcgcgccggcgcctccgcaaagaaggagatcggccggatgaccacgctcatc
aagaaggtgctcggggaggaggccgggcagcaggttctggacatcggcgtcgtgagcgcc
accgactacctgcgccgcttctgctcccggctcgggatgggcaaccaggagatgcgcgcc
gcgcaggaggcggcgcggaggctggaggctggcctcgacgtgcggcgcaaccccgagtcc
atcgcagccgccatcagctacatggtcgtgcagcgcgccggcgccagcaagaccgccaag
gacgtgtccatggccaccggcgttgccgaggtcaccatcaaggaggcgcacaaggacctc
gccccgcacgctgagatgctcttcgcctaa
DBGET
integrated database retrieval system
