Setaria viridis (green foxtail): 117850759
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Entry
117850759 CDS
T07951
Name
(RefSeq) la-related protein 6B
KO
K15191
La-related protein 7
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117850759
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
117850759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
PAM2
U_exon
Motif
Other DBs
NCBI-GeneID:
117850759
NCBI-ProteinID:
XP_034588512
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All DBs
Position
3:6302524..6308004
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AA seq
494 aa
AA seq
DB search
MPQMEGAADQIAAGWFTADSAAERPGGLPRSGSSSRLNAQAPEFVPRGPPSPAPPAVVVP
PPPQVIRVFAAPPPPPRAAFFAPPPPRPFEYYAPVGGRGGFTTKEQQVPEPEPDAELLPP
AAKAEQAVDGLEDEVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPISVIAGFKK
VKASVRNNFMLAEALRTSSKLVVSDDGKRVKRQEPFTESDLQELKSRIVVAENLPGDPSY
QNLKKIFSAVGSVISIRTCYPQTPNGSGPATNRSAKLDMLFSNKLHAFVEYETPEDAEKA
IVALSDEENWRNGLRVRLLNTCSAKGAGKGKNGTHGTDGNGEEDVSTSNQSNERQSEETS
QLLDVLPDHLFDETFNDKEVPKRGKGRGRGGRGRGRGNNQYNNYHHSNNQHHQNHQPHYN
HHGNNHQGGNRGGAHPVGTPPHNLMSKPEQHQQLPIGASKLPPGPRMPDGTRGFTMGRGK
PQAVLPGLCAVGEA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagatggagggggccgccgaccagatcgccgccggctggttcaccgctgactcg
gcggccgagcggccgggggggctgccgaggagcggctcgtccagccgcctcaacgcgcag
gcgccggagttcgtgccacggggcccgccgtcgccggcgccgcccgcggttgtggtgccg
ccaccgccccaggtgatccgagtgttcgccgcgcctccaccgccgccgcgcgcggccttc
ttcgcgccgcccccgccccggccgttcgagtactacgcgccagtggggggacgcggcgga
tttaccaccaaggagcagcaggtgccggagccagagccggatgcggagctgctccctccc
gcggcgaaggcggaacaggcggtggacgggctcgaggacgaggtggtgcacaagatcacc
aagcaggtggagtactattttagtgatataaacttggctaccacagaacatttgatgaga
ttcatcaccaaagatcctgagggatacgtgccaatatcagttattgctggcttcaagaaa
gtaaaagcttctgtgcgtaacaacttcatgcttgcagaagctctccgaacctcatcaaaa
cttgttgtaagtgatgatggaaaaagggtcaaacgtcaagagccatttactgaatctgat
ttgcaggagcttaagtcccgaattgttgttgcagaaaatcttcccggtgatccttcctac
cagaatcttaagaagatattttcagctgttggcagtgtgatttcaatccgtacttgctat
cctcagactccaaatggctctggtcctgcaactaatagatctgccaagctagatatgctt
tttagtaacaagttgcatgcttttgtggagtacgagacacctgaggatgctgagaaggca
attgtggcgcttagtgatgaggaaaactggagaaatggacttagagtccgcttgctgaat
acttgctcggcaaagggggcaggcaaagggaaaaatggaacacacggaactgatggaaat
ggtgaggaggatgtctccacttcgaaccaatcaaatgagagacagtctgaagaaacctct
caactgttagatgtcttgccagatcacttgtttgacgagaccttcaatgacaaggaagtt
ccgaaacgcggcaaagggcgaggtcgcggtggcagagggcgcgggcgtggcaacaaccag
tacaacaattaccaccacagcaacaaccagcaccaccagaaccaccagccacactacaat
caccacggcaacaaccaccaaggtggcaaccgcggcggcgcccacccggttggaactccg
ccgcacaacctaatgagcaagcccgagcagcaccagcagctgccgattggggccagcaag
cttcctccgggtccccgcatgcctgatggtacccggggtttcaccatgggcagagggaag
cctcaagctgtgctaccaggtctgtgcgcggttggcgaggcttag
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