Setaria viridis (green foxtail): 117850823
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Entry
117850823 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2 isoform X1
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117850823
03036 Chromosome and associated proteins [BR:
svs03036
]
117850823
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117850823
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117850823
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
117850823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
Prok-RING_1
PHD
zf-RING_5
zf-RING_6
zf-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
117850823
NCBI-ProteinID:
XP_034588590
LinkDB
All DBs
Position
3:complement(6004050..6009249)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDLPCDEDGVCMVCRAAAPPEVDLLRCSTCATPWHSPCLSERPALSDAASWSCPDCSGS
SAAPAAAPAAGGELVAAIRAIEADATLSDQEKARRRQKLLAGSAAADDENKDEGEGDDVL
EMLGRSFSCAFCLKLPDRPVTTPCGHNFCLKCFQKWIHSGKKTCGKCRAQIPSKMAQQPR
INSNLVEAIRMAKISKNANSDSSAATYHYIRNDDRPDKAYRTERAKRAGKANASSGQIFV
TIAPDHFGPILAENDPKRNIGVRVGETWGDRLECRQWGAHFPHIAGIAGQSTHGAQSVAL
SGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSFDQKFEKMNAALRISCMKGYPVRVV
RSHKEKRSSYAPESGLRYDGIYRIEKCWRKIGIQGKFRVCRYLFVRCDNEPAPWTSDDHG
DRPRPLPKIPELQDATDITERKGRPAWDYDEKEGWRWMAPPPISRKPVLTGVSETDKQIR
RRTRCAQMSVAERLLKEFACSICQEVIKEPLTTPCAHNFCKTCLLGAYDTQSSVRERSRG
GRTLRAQKIVKKCPSCPTDICDFLVNPQINREMMDLIESLQKAVEEGGDDTNECGDDSDD
LEETDGGLAKGEDDISLNEDEQGSDEDKKMDCEIEDSDVNADGSVKTVAEIKEGDEQPNK
KDKGDAEEGKDAMKNKTNATEVVDALVEEDAVEEIKGSKEVDNNESQQPQKRKGDDTDIG
IDGSKRMKTSASLDETAGV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccagacctcccctgcgacgaagatggcgtctgcatggtctgccgcgccgccgccccg
cccgaggtcgacctcctccgctgctccacctgcgcgacgccatggcactccccctgcctc
tccgagcgccccgcgctctccgacgcagcaagctggagctgccccgactgctctggttcc
agcgctgctcccgccgccgcccccgcggcaggaggtgagctcgtcgccgccatccgcgct
atcgaggccgacgctactctctccgaccaagagaaggcgcgacgccgccagaagctcctc
gccggatctgccgccgccgatgacgagaacaaggacgagggtgaaggggatgatgtcctc
gagatgcttggcagaagcttcagttgcgccttctgcttgaagctgcccgatcgccccgtc
accacaccatgtggccataacttctgtttgaaatgcttccagaagtggatacatagtgga
aagaagacatgtggcaagtgtcgtgcacagatcccgtcaaaaatggcacagcaaccacga
attaattccaatttagtggaagctattcgcatggcaaaaatttcgaagaatgctaattca
gatagctcagcagcgacatatcattacatccggaatgatgataggcctgacaaggcatat
agaactgagagggcaaagcgggctggaaaggcaaatgcatcaagcggccagatcttcgtg
accattgctccagaccattttggtcccattcttgcagaaaatgaccccaagaggaacatt
ggcgttcgagttggggaaacatggggagaccgacttgaatgcaggcaatggggtgctcat
tttcctcatattgctggtattgctggccagtccacacatggtgctcagtcagtagcactt
tcaggaggatacgaagatgatgaagaccatggggagtggttcctttatactggaagtggt
gggagagatctaagcggaaacaagagaacaaacaaggaacaatcttttgatcaaaagttt
gagaagatgaatgcagctttgcgtatcagttgcatgaagggttacccggtccgggttgtg
cggtcccacaaagagaagcgctcttcctatgctcctgaatctggtttgaggtatgatgga
atttatagaattgagaaatgctggaggaagattggtattcagggtaagttcagagtatgc
aggtatctctttgtacgctgtgacaatgaaccagctccttggaccagtgatgatcatggt
gaccgtccaaggccattgcccaagataccggagctacaagatgcaactgatataactgag
agaaaaggacgtcctgcatgggactatgatgagaaagaaggttggagatggatggctcct
cctccaatcagcagaaagcctgttctcactggtgtttctgagactgacaagcaaatccgg
agaagaacaaggtgtgctcagatgtctgtggccgaaagactgctgaaagagtttgcttgt
tctatctgccaggaagtgattaaagaaccactcactactccctgtgctcacaacttttgc
aagacttgtttgcttggggcatatgatacccagtcctctgtgagagaaagaagccgtggt
ggtcggactctaagggctcaaaagattgtgaagaagtgcccttcctgcccaactgatatc
tgtgacttcctagtgaatccacagatcaaccgagagatgatggatctgatcgagtctttg
cagaaggctgttgaagaaggcggtgatgacactaacgaatgcggtgatgatagtgatgac
ttggaggaaactgatggtggtttggcaaagggagaggacgatatcagcttgaatgaggat
gagcaaggtagtgatgaggataagaagatggattgcgaaatcgaagattcagatgtcaac
gctgatggttctgtcaaaactgtggctgaaatcaaggagggagacgagcagcctaataag
aaggataaaggagatgctgaggaaggaaaagatgctatgaagaacaagacgaatgcaaca
gaagtggtggatgcgttagtcgaagaagacgctgtggaagagatcaagggctccaaggag
gttgacaacaatgaaagccagcagcctcagaagcgcaagggagacgacactgacattggc
atagatggcagtaaaaggatgaagactagtgcatccttggacgagactgctggtgtgtaa
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