Setaria viridis (green foxtail): 117850871
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Entry
117850871 CDS
T07951
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117850871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
svs03011
]
117850871
Ribosome [BR:
svs03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
117850871
Bacteria
117850871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Motif
Other DBs
NCBI-GeneID:
117850871
NCBI-ProteinID:
XP_034588646
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Position
3:complement(11802712..11806511)
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AA seq
514 aa
AA seq
DB search
MPPPSLLSLLPAASISPRVRRRQGKHHKAPTASSHLLCSRRAAAPSPLHVHGSSSSSADG
GRGDELHLLEKPSPSVAEDAEEEEPEPVPVLSTEEALAPFLKFFQVKSTDPDAEADAAAG
ERAESDAAGEAARSVGLSAGGRVVRYYDPKPGDFVAGVVVRSDGRTLDVDIGAGGEPALM
LNKEAVPMPGEEFGYLACDVGSERAAEFATEGRVGVVVRHIGGGEEDGVLTSGRNVKEKG
AAVAGVGAIVFAEVLGRTLGGRPLVSARRLFRRVAWHRARQIKQLNVPIKVKIYEWNAGG
LLSRIEGLRAFLPKPEMMTRPRNFTDLKNKVGQEIHVCITRIDEGANELIISEKEAWAVT
YLREGTLLQGTVRKLFPYGAQIRIGETNRGGLLHMSNITHGQLRSVADVLRVGETVKALV
IKSTTPDRIALSTKDLESEPGLFITDKEKVFSEAEEMGQRYREQIAEPPRSGKAQDPCND
AVPFDNEAQSYANWKWLRFSKPDEAVNRKSRSEF
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccccctccctcctctccctcctccccgccgcgtccatctcacctcgagttcga
agacgccagggcaagcaccacaaggcccccaccgcgagcagccacctcctctgctcccga
agagcagcggccccatcaccgctccatgtccacggctcgtcgtcctcctcagccgacggt
ggcagaggcgacgagctccacctcctcgagaagccgtccccctccgtcgcggaggatgcc
gaggaggaggagcccgagcccgtcccggtgctgtccacggaggaagcgctcgcgcctttc
ctcaagttcttccaggtgaagagcactgaccccgacgcggaagcggacgccgccgcaggg
gagcgcgcggagagcgacgcggcgggtgaggcggcgaggagcgttggattgtccgccggc
gggcgtgtggtcaggtactacgaccccaagccaggggacttcgtcgccggcgtcgtggtc
cggagcgacgggaggaccctcgacgtcgacatcggagccggtggcgagccggcgttgatg
ctgaacaaggaggcggtgccgatgcccggggaggagttcgggtacctggcgtgcgacgtc
gggtcagagcgtgcggccgagttcgccacggaagggagagtgggcgtcgtggtcaggcat
atcggcggcggagaggaggatggggtgctgacaagcggcaggaatgtgaaggagaaaggc
gcggcggtggcgggcgttggcgcgatcgtgttcgctgaagtcctcggtcgaacacttggc
gggcggccgctggtgtccgcacgcaggctgtttcggcgcgtcgcgtggcacagagcgagg
cagataaaacagctaaatgtacccatcaaggtcaaaatttatgagtggaatgctggtggc
ttgctgtctagaattgagggccttcgtgcattcctccctaagcctgagatgatgactaga
ccaagaaatttcacagatctaaagaataaagttggtcaagaaattcatgtctgtattaca
aggattgatgaaggggctaacgaattgataattagtgaaaaagaagcatgggcggtgaca
taccttagagaagggactctcttgcaaggaacagtccgcaagttatttccgtatggtgca
caaattaggattggcgagactaacagaggtggcttactgcacatgtccaacataacacat
ggtcagctgagatctgtcgctgatgtgctaagagtgggtgagacggtgaaagctcttgtc
attaaatcgacaactccagacagaattgccctcagcacaaaggacctcgagagcgaacct
ggactgtttatcacagacaaagagaaggtgttttctgaggctgaagagatggggcagaga
taccgggagcagattgcagagccacctcgatcgggcaaggcgcaagacccctgcaacgat
gctgttcccttcgacaacgaggcccaatcctatgctaactggaaatggttgcgatttagc
aagccagatgaagcagtaaaccgcaaatctagatctgaattttga
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