Setaria viridis (green foxtail): 117850880
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Entry
117850880 CDS
T07951
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117850880
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117850880
Enzymes [BR:
svs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117850880
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117850880
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Helicases
117850880
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
UvrD-helicase
DUF7533
Motif
Other DBs
NCBI-GeneID:
117850880
NCBI-ProteinID:
XP_034588656
LinkDB
All DBs
Position
3:complement(18614656..18619337)
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AA seq
604 aa
AA seq
DB search
MSKKLGKPPPAAAAAVQEEGREELFASCSFADLGLHPTLCAHLQDKMGFQTPTRIQAQAI
PVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVDRTHGTFALVLVPTRELCLQVY
GIAQQLVHRFHWIVPGYVMGGENRAKEKARLRKGISILIATPGRLLDHLQHTASFVYSNL
RWIVFDEADSILELGFGKAVEDILENLGSRNGAPDQNKNKGEHIRRQNLLLSATLNEKVN
RLAKISLKNPVMIGLDDQKKPSGKTNRLGNSHTSLLSDDDEDRILEKRNDILEHADAVDD
FKLPAQLVQRYVKVSCGSRLAVLLTILKSLFERQISQKVVIFLSTCDSVDFHHTVLSQLE
WSSGPQLDMDKKQKFLSCKVFRLHGNMEQDDRKKSFLGFGSEKSAILVSTDVAARGLDFP
KVKYIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIELDYLKDLESHGVSLTEYPF
QKVLDSFPVNGQKPHKRKMISLDMHPWIMSLQRSLEGFVTAEDATKKLARDAFCSWVRAY
TAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLVGRSHQVQLKKRKKEQKRERPAKRRKL
PSKK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagctcggtaagccgccgccagcggcggcggcggcggtgcaggaggagggg
agagaggagctgtttgcttcatgctccttcgccgacctcgggctccaccctaccctctgc
gcccaccttcaagataagatgggttttcaaacaccgacgcgaattcaagctcaggcaatt
cctgtcgccatgtctggacagcacatgctagtgaaggctgcaactggcactgggaaaact
cttgcgtaccttgcacccattgttcaccttctccagatgagggagcctcgtgtcgataga
actcatggaacttttgcgttggtgctcgtgccaacgcgagagttatgcttacaggtttat
gggattgcacagcagctggttcatcgttttcattggattgtccctgggtatgtcatgggt
ggtgaaaacagagcaaaagagaaagcaagactgcggaaaggaatatcaattctcattgct
acccctggacgccttcttgaccatttgcagcatactgcatcatttgtttattcaaatttg
cgctggatagtttttgatgaagctgacagcattcttgaacttggttttgggaaagcagtt
gaggatattctagaaaacttgggttcaaggaatggtgctcctgatcaaaataaaaacaaa
ggagagcatatccgaaggcaaaaccttctcttatctgcaactcttaatgagaaggtgaat
cggttagctaaaattagtttgaagaacccagtgatgattggccttgatgatcaaaagaag
ccctcagggaaaaccaacaggctggggaacagtcatacttctctattatctgatgatgat
gaggacaggatactggaaaagcgaaatgatatattggaacatgcagatgcagttgatgat
ttcaagcttcctgcacaactggtccaaagatacgttaaagtttcatgtggctcgaggctt
gcagttcttcttacgattctcaaatctctatttgaaagacaaatctctcaaaaggttgtt
attttcttgtcaacctgtgactctgttgatttccaccatacagtactcagccagcttgaa
tggagctctggcccccaacttgatatggataagaagcaaaagtttcttagctgtaaagtg
ttccgtttgcatggtaatatggagcaggatgatcgcaaaaagtcatttctgggttttggt
tctgagaaatctgcaattcttgtatctactgatgttgctgctagaggcttggactttcca
aaagtcaagtacatcatacagtatgattctcctggagaagcttctgaatacgttcacagg
gttggaagaactgcaaggattggtgaaaagggggaggctctcctgtttctgcaacctatt
gaacttgactacttgaaagatctggagtcacacggtgtatcactgacagaatatcccttt
caaaaggttttggatagttttcctgtaaatggacagaaacctcacaaaaggaagatgata
tctttagacatgcacccttggataatgtctctgcagagatcgctggagggttttgtcact
gctgaggatgctacaaagaagcttgccagggatgctttctgttcctgggttcgtgcctac
actgcccacagaggcgaactgaagaagattttcatggtcaagaagctccacctagggcac
gtagcgaggagcttcgggctgaaggagcagccatcgttggtggggaggtcgcaccaggtg
cagctgaagaagaggaagaaggagcagaagcgtgaacggcctgccaagaggagaaagctc
ccctccaagaagtga
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