Setaria viridis (green foxtail): 117851037
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Entry
117851037 CDS
T07951
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117851037
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svs04040
]
117851037
Ion channels [BR:
svs04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117851037
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117851037
NCBI-ProteinID:
XP_034588826
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Position
3:complement(48646254..48648641)
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AA seq
751 aa
AA seq
DB search
MFGCGGYRTQFINGRRDKFVRLDDAASSSSAVCSPRVSFSASGAMDHHHGGHGHGHGGGF
HMDSYFSGNPSAAAAKFRARSVRVATGVMNRSERLKSIGLVFQEDFRKMSQKVFDPQDAF
LARMNRAFVFACIVSVAIDPLFLYLLAVKYTDKNTCIGFDRNLATVATVVRTAVDAFYLS
RIALQFRTAYIAPSSRVFGRGELVIDSAAIARRYLRRFFAVDLLAVLPLPQVSIWNFLNR
PKGADLLPTKNALLFTVLAQYVPRLVRFYPITSELKRTTGVFAETAFGGAAFYLLLYMLA
SHMVGAFWYLLAIERLDDCWRDKCTKLNFHQCRTYMYCGGGSQGQSGFLEWRTMIRQVLQ
QECAPVDNSGTGFPYGIYTTAIQSGVYSTENLTAKILFCLWWGLQNLSTVGQGLETTHYK
GEQLFSITLALVGLILMALLIGNMQTYLQSMTLRLEEMRLKRRDSEQWMRHRVLPDDLRD
RVWRHNQYRWLETRGVDEDALVRGLPKDLRRDVKRHLCLRLVRRVPLFANMDERLLDAIC
ERLKPSLCTESTFIVREGDPVDEMLFIIRGRLESSTTDGGRTGFYNRGLLKEGDFCGEEL
LTWALDPKAAANFPLSTRTVRAISEVEAFALRAEELKFVAGQFRRLHSKQLQQTFRFYSQ
QWRTWASCFIQAAWRRHLKRRAAEQRRREEEAAADEADAAGASTSRIRTTMLVSRFAKNA
MRGVQRQRSVREDTLIMLPKPPEPDFASMDY
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctgcggcggctaccggacgcagttcatcaacgggcgcagggacaagttcgtg
aggctcgacgacgcggcgtcgtcgtcgtcggcggtgtgctccccgcgtgtgtccttctcg
gcatccggcgccatggaccaccaccacggcggccacggccacggccacggcggcgggttc
cacatggacagctacttctccggcaacccatccgcggccgcggccaagttccgcgcgcgg
tcggtgcgcgtggccaccggcgtgatgaaccgctccgagcggctcaagagcatcgggctc
gtcttccaggaggacttccggaagatgtcccagaaggtgttcgacccgcaggacgcgttc
ctggcgcgcatgaaccgtgccttcgtcttcgcgtgcatcgtctccgtcgccatcgacccg
ctcttcctctacctcctcgccgtcaagtacaccgacaagaacacctgcatcggcttcgac
cgcaacctcgccaccgtcgccaccgtcgtccgcaccgccgtcgacgccttctacctctcc
cgcatcgcgctccagttccgcaccgcctacatcgcgccgtcctcccgcgtgttcgggcgc
ggcgagctcgtcatcgactccgccgccatcgcacgccgctacctccgccgcttcttcgcc
gtcgacctcctcgccgtcctgcccctcccgcaggtctccatctggaacttcctcaaccgg
cccaagggcgccgacctgctccccaccaagaacgcgctcctcttcacggtgctcgcgcag
tacgttccccgcctggtgcggttttaccccatcacctccgagctcaagcgcaccaccggc
gtcttcgccgagacggccttcggcggcgccgccttctacctcctcctctacatgctcgcc
agccacatggtgggcgcgttctggtacctcctcgccatcgagcggctcgacgactgctgg
cgggacaagtgcaccaagctcaacttccaccagtgccggacctacatgtactgcggcggc
ggcagccagggccagtcggggttcctcgagtggcgcaccatgatccgccaggtcctccag
caggagtgcgcacccgtcgacaactccggcaccgggttcccctacggtatctacacgaca
gcgatccagtccggcgtctactccaccgagaacctcaccgccaagatcctcttctgcctg
tggtggggcctgcagaacctgagcacggtggggcaggggcttgagacgacgcactacaag
ggggagcagctcttctccatcacgctcgccctcgtcgggctcatcctcatggcactcctc
atcggcaacatgcagacctacctccagtctatgacgctccggctcgaggagatgcggctc
aagcgccgggactcggagcagtggatgcgccaccgcgtgctgcccgacgacctccgggac
cgggtgtggcgccacaaccagtaccggtggctcgagacccgcggcgtcgacgaggacgcc
ctggtccggggcctccccaaggacctccgccgcgacgtgaagcgccacctctgcctccgc
ctagtccgccgcgtcccgctcttcgccaacatggacgagcgcctcctcgacgccatctgc
gagcggctcaagcccagcctctgcacggagtccaccttcatcgtgcgcgagggggacccc
gtcgacgagatgctcttcatcatccggggacggctcgagagctccaccaccgacggcggc
cggacggggttctacaaccgggggttgctcaaggaaggggacttctgcggggaggagctg
ctgacgtgggcgctggatccgaaggcggcggcgaacttcccgctgtcgacgaggacggtg
agggcgatctcggaggtggaggcgttcgcgctgcgggcggaggagctcaagttcgtcgca
gggcagttccggcggctgcacagcaagcagctgcagcagacgttcaggttctactcgcag
cagtggaggacgtgggcgtcgtgcttcatacaggccgcgtggaggaggcacctcaagagg
agggcggcggagcagaggaggagggaggaggaggccgccgccgacgaggccgacgcggcg
ggggcgtccaccagcaggatcaggaccacgatgctcgtgtccaggttcgccaagaacgcc
atgcggggagtgcagcggcagaggtccgtcagggaggacaccctcatcatgctgccaaag
ccgccagagccggacttcgcctccatggattactag
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