Setaria viridis (green foxtail): 117851272
Help
Entry
117851272 CDS
T07951
Name
(RefSeq) 3-ketoacyl-CoA synthase 6
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00062
Fatty acid elongation
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs04626
Plant-pathogen interaction
Module
svs_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
117851272
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117851272
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
117851272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
117851272
NCBI-ProteinID:
XP_034588951
LinkDB
All DBs
Position
4:complement(11072557..11074707)
Genome browser
AA seq
491 aa
AA seq
DB search
MGSPAAHQLKQLKPLYQHVVNNFVAVLAAPLAVAAAVSAARAGPEELLARVQALRVAYVF
LAVLVPAAAAALYLMLRPRPVYLVDYACFRTRPNCRVPFATFLEHAKLVTFVEGASIDER
SVRFMTRLLERSGLGEETCLPPAHHYIPPYRNMEASRAEVELVIFSAIDDLLAKTGISPS
AIDILVVNCSLFAPIPSFTDMIINRYGMRPDIRNVHLSGMGCSAGLISVGLARNFLQVAP
KGAHALVVSTETITPNYYVGKERAMLLPNCLFRMGGAAVLLSTSRARARFRLARVVRTLT
GAQDSAYRCVFQEEDGEGHRGINLSKDLMTIAGDALKANITAIGPLVLPASEQLLFAVSF
IARRVLNRRVKPYLPDFRTAFEHFCIHAGGRAVIDELQRSLGLSDEDVEASRMALHRFGN
TSSSSVWYELAYTEAKGRMRKGDRVWMIGFGSGFKCNSAAWECIEPARTAEGPWEESICR
YPVDIPEVLKH
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgccggcggcgcaccagctgaagcagctcaagccgctgtaccagcacgtggtg
aacaacttcgtggccgttctcgcggcgccgctggccgtggcggccgccgtcagcgcggcg
cgcgccgggccggaggagctcctcgccagggtgcaggcgctccgggtggcgtacgtgttc
ctcgccgtgctcgtccccgccgcggcggcggcgctgtacctgatgctgcggccccggccc
gtgtacctggtcgactacgcctgcttccgcacgcggcccaactgccgcgtccccttcgcc
accttccttgagcacgccaagctggtgaccttcgtggagggcgcctccatcgacgagcgc
agcgtccggttcatgacccggctgcttgagcgctcggggctcggggaggagacctgcctt
ccccctgcgcaccactacatccccccgtaccggaacatggaggcctcccgcgccgaggtg
gagctcgttatcttctcggccatcgacgacctgctcgccaagacgggcatcagcccgagc
gccatcgacatcctcgtcgtcaactgcagcctcttcgcgcccatcccgtccttcaccgac
atgatcatcaaccggtacgggatgcgcccggacatccgcaacgtgcacctgtccgggatg
gggtgcagcgcggggctcatctccgtggggctcgcgcgcaacttcctgcaggtggctccc
aaaggcgcgcacgcgctggtggtgtcgacggagaccatcactcccaactactacgtgggc
aaggagcgcgccatgctgctccccaactgcctcttccggatgggcggcgccgctgtgctg
ctgtcgacgtcgcgcgcccgggcgcggttccggctggcccgcgtggtgcgcacgctgacg
ggcgcccaggacagcgcgtaccggtgcgtcttccaggaggaggacggcgagggccatcgt
gggatcaacctgtccaaggacctgatgaccatcgcgggcgacgcgctcaaggccaacatc
accgccatcgggccgctggtgctgccggcgtcggagcagctgctgttcgcggtgtccttc
atcgcgcgccgcgtgctgaaccgccgcgtgaagccgtacctgcccgacttccgcacggcg
ttcgagcacttctgcatccacgcggggggccgggcggtgatcgacgagctgcagcgaagc
ctggggctgtcggacgaggacgtggaggcgtcgaggatggcgctgcaccggttcgggaac
acgtccagcagctcggtgtggtacgagctggcgtacaccgaggccaagggacggatgagg
aagggcgaccgtgtgtggatgattgggttcgggtcggggttcaagtgcaacagcgcggcg
tgggagtgcatcgagccggcgcgcaccgccgaggggccatgggaggagagcatctgccgc
taccccgtcgacatcccggaggtgctcaagcactag
DBGET
integrated database retrieval system