Setaria viridis (green foxtail): 117851345
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Entry
117851345 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K25006
RNA-binding protein 24/38
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117851345
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117851345
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117851345
NCBI-ProteinID:
XP_034589038
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All DBs
Position
4:complement(7556736..7561163)
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AA seq
314 aa
AA seq
DB search
MAAAPSSSSAASPGAGGGGPRPYRSRFGDTTLTKVFVGGLAWETPSEGLRQHFERYGDIL
EAVVITDRLTGRSKGYGFVTFREPEAARRAVQDPNPTIAGRRANCNIASLGPPRPAQPRG
SRGPYPGPHLQVPAQGPHFIPRAPASPQMMPQHGGGPAAIYPSQFGYWYPPDFQYPQAMA
NPQVLQNYYPQMYGLTSPTASPYHQYVGYMAPPAPTPRPLLPPPPPAQQVAVQPLAQHPP
AAQQVAMQPLLQHPTPQIQSSFFPAPSLPPNFRLQLPPPQALSVLPPNTTESQPADQAAT
SAARVTNASSAPGA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctccgtcgtcgtcgtcggccgcgtctccgggcgccggcggcggcgggccg
cggccgtaccggtcgcggttcggcgacacgaccctgacgaaggtgttcgtgggcgggctg
gcgtgggagacgccctcggaggggctccggcagcacttcgagcggtacggcgacatcctg
gaggccgtcgtcatcaccgaccgcctcaccggccgctccaagggctacggattcgtgacg
ttccgggagccggaagcggcgcggcgcgcggtgcaggacccgaacccgacgatcgctggg
cggcgcgccaactgcaacattgcctcgctcgggccgccccgccccgcccagcctcgaggc
agcagggggccatatccagggccccacttgcaggtcccggcccagggcccgcacttcatc
cccagggcaccggcctctccccagatgatgccccagcacggcggtggcccggctgcgatc
tacccgtctcagttcgggtactggtacccacctgactttcaatacccacaggcaatggcc
aatccgcaagtgctgcagaactactaccctcagatgtatggcctgacctcgccgacggcg
tcaccctaccaccagtacgtcgggtacatggcgcctccggctccgacgccgaggccacta
ctccctccgccaccgccggcgcagcaggtcgccgtgcaaccgttggcgcaacatcccccg
gcggcacagcaggtcgcaatgcaaccgttgctgcagcacccgacgccacagattcagagc
tccttctttcccgctccttcgcttccgcccaacttcaggcttcagttgccgccgccccaa
gctttgtcagtactgcctcccaacacaacagaatcgcagccagctgatcaggccgctacc
tctgcagctcgagtgacaaacgcgagcagtgctccgggtgcctga
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