Setaria viridis (green foxtail): 117851376
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Entry
117851376 CDS
T07951
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117851376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117851376
Spliceosome [BR:
svs03041
]
Complex B
Other components
Prp19-related factors
117851376
Complex C
117851376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
HEXIM
Motif
Other DBs
NCBI-GeneID:
117851376
NCBI-ProteinID:
XP_034589073
LinkDB
All DBs
Position
4:7299490..7301005
Genome browser
AA seq
500 aa
AA seq
DB search
MAAKTVPPYGRRAGLVPRRQEDFGGGGAFPEVHVVQYPLSMGLARGDPDTAAGSLSNVLA
LTVDARGRVAFDAVVRQGENAAKIVYSSHADLVPKIVAVPDQDAACEDEDEGAATTARTR
AALQVIIDARLSAAQPASVRPRNREDDPAFVRYRPGRQSAAFSSGAEDRVVRMAHAQEDP
VLPPRHRRRRVPRPAGSPPVTVMHSPPRPVSRKDAEDWKIPPSVSDWKNAKGYCIPLDKR
LASSDGGRRMQGVQISDGFAGLSEALYVAEQKAREAIQMRDRVRKELMMKERQERERELR
EIANRARAEAASAAAPAAPVDTERMQREERRRQREWERRREAWSGKKSSVTRDADRDVSE
RIALGMASTGGAAGAGEVTYDERLFNQETGINSGFAATDDMYSVYSGRLFAAQPALSTLY
RLSRHGDSDIYSGDADKQIEKITRTERFKPDRGFSGTADRPAGKRERPVEFDMPEESAEA
DDPFVELDQYMTKVKEGKKH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaagaccgtgccgccctacggcaggcgcgcgggcctcgtgccccggcggcag
gaggacttcggcggcggaggcgccttccccgaggtgcacgtcgtgcagtaccccctctcc
atgggcctagcccgcggcgaccccgatacggcggcaggatcgttgtccaacgtgctggca
ctgaccgtcgacgcgcgcggccgcgtcgcgttcgacgcggtcgtccggcagggcgagaac
gccgccaagatcgtgtactccagccacgccgacctcgtccccaagatcgtcgccgtgccc
gatcaggacgccgcctgcgaggacgaggacgagggggcagccaccaccgcgcggacgcgg
gcggcgctgcaggtgatcattgacgcccgcctctccgcggcgcagccggcgagcgtccgg
ccgcgtaaccgggaggacgacccggcgttcgtcaggtacaggccggggcggcagtcggcg
gcgttcagctccggcgccgaggatcgggtcgtgaggatggcgcacgcgcaggaggatccg
gtgctgccgcccaggcacaggcgcaggcgggtgccgcggccggccgggtcgccaccggtc
accgtgatgcactcgccgccgcgccccgtgtcgcggaaggacgcggaggactggaagatc
ccgcccagcgtctcggactggaagaacgccaaggggtactgcatcccgctcgacaagcgg
ctggcgtcgtcggacggcggccggcggatgcagggcgtccagatcagcgacggcttcgcc
ggcctctcggaggcgctgtacgtcgcggagcagaaggccagggaggccatccagatgcgc
gacagggtgcgcaaggagctgatgatgaaggagcggcaggagcgggagcgggagctgcgc
gagatcgcgaacagggcgcgcgccgaggcggcatccgccgctgctccggcggcgccggtg
gacacggagaggatgcagcgcgaggaacggcggcgccagagggagtgggagaggcggcgg
gaggcgtggagcggcaagaagagcagcgtcacaagggacgcggaccgggacgtcagcgag
aggatcgcgctcggcatggcgagcaccggcggcgccgccggcgcaggcgaggtcacctac
gacgagaggctattcaaccaggaaacggggattaactccgggttcgccgccacggacgac
atgtacagcgtgtactccgggaggctcttcgcagcgcagccggcgctgtcgacgctctac
aggctcagcaggcacggcgactccgacatatacagtggcgacgccgacaagcagatcgag
aagattaccaggacggagaggtttaagcctgacagggggttctctggcactgcggaccga
ccggccggcaagagggagaggccggtcgagttcgatatgcctgaggagagcgctgaagcc
gatgaccctttcgtcgaacttgatcagtacatgactaaggtgaaggaagggaagaaacat
tga
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