Setaria viridis (green foxtail): 117851400
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Entry
117851400 CDS
T07951
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117851400
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117851400
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117851400
03019 Messenger RNA biogenesis [BR:
svs03019
]
117851400
03041 Spliceosome [BR:
svs03041
]
117851400
Enzymes [BR:
svs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117851400
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
117851400
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117851400
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117851400
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117851400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
117851400
NCBI-ProteinID:
XP_034589101
LinkDB
All DBs
Position
4:27745940..27748675
Genome browser
AA seq
343 aa
AA seq
DB search
MEMSRAALDDVIRRLLDARRWRPAGKQQQQLLAEGEIRQLCAGAKAVFLRQPNLLELDAP
INVCGDVHGQFRDLVRILQELGGLPPRSKYLFLGDYVDRGDQSLETICLLLAYKVRYPEH
VFLLRGNHECASINRIYGFYDECKRRYTVRLWRTFTDCFNCLPAAALVDDRILCVHGGIS
PHLRSLDQIRDLPRPCDVPDEGLLCDLLWSDPAAGVRGWAPNDDRGVSCTFGADVLKAFL
RTHDLDLLCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAIMSIDADLVCSFHII
KPAAGDTTTNRGIAAAWGRSSAASASSSSSSGRSTKKGLMRYW
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggagatgagccgcgcggctctggacgacgtgatccggcggctcctggacgcgcggcgg
tggcgcccggcggggaagcagcagcagcagctgctggcggagggggagatccggcagctc
tgcgccggcgccaaggccgtgttcctgcggcagccaaacctcctggagctggacgcgccc
atcaacgtctgcggcgacgtgcacggccagttccgcgacctcgtccggatcctgcaggag
cttggcggcctcccgccgcggagcaagtacctgttcctgggcgactacgtggaccgcggc
gaccaaagcctggagaccatctgcctgctgctggcctacaaggtccggtacccggagcac
gtgttcctcctccgcggcaaccacgagtgcgcctccatcaaccgcatctacggcttctac
gacgagtgcaagcgccgctacaccgtccgcctctggcgcaccttcaccgactgcttcaac
tgcctccccgccgccgcgctcgtcgacgaccgcatcctctgcgtccacggcggcatctcg
ccgcacctccgcagcctcgaccagatccgggacctgcccaggccctgcgacgtcccagac
gagggcctgctctgcgacctgctctggtcggacccggccgccggcgtccggggctgggcg
ccgaacgacgacaggggcgtctcatgcaccttcggcgccgacgtgctcaaggccttcctc
cgcacccacgacctagacctcctctgcagggcgcaccaggtggtcgaggacggatacgag
ttcttcgcagaccgccaactcgtcaccgtcttctccgcgccaaactactgcggcgaattc
gacaacgccggcgccatcatgtccatcgacgcggacctcgtatgctccttccacatcatc
aagccggcggcgggcgacacaaccaccaacaggggcatcgccgccgcctggggccgcagc
agcgccgcctcagcgtcgtcgtcctcgtcttccggcagaagcacaaaaaaggggttgatg
cgctactggtag
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