KEGG   Setaria viridis (green foxtail): 117851526
Entry
117851526         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K12847  U4/U6.U5 tri-snRNP-associated protein 2
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117851526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:svs03041]
    117851526
Spliceosome [BR:svs03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    117851526
SSDB
Motif
Pfam: UCH zf-UBP Cu-oxidase_4 zf-UBP_var
Other DBs
NCBI-GeneID: 117851526
NCBI-ProteinID: XP_034589245
LinkDB
Position
4:complement(37301697..37306453)
AA seq 548 aa
MGADEQPSPTRKRDREEEELADGGAAEKRARAEGDSLLGLASYEDDDEEEVARGQANGRG
ADGDAEEGEDDDDEEDDVRRAPERRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSN
LNVYACLVCGKYFQGRGLKSHAYTHSLEAGHHVFINLQTERAYCLPDGYEINDPSLEDIR
HVLNPRFTREQVLNLDKNKQWSRALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRVTPLR
NFFLIPENYQHSKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASNKRFQIGVQS
DPVEFMSWLLNTLHAKLKSSKKKNRSIIHDCFQGELEVVKEVHRKHIMEKTEDGDELNGD
ASSVVGTDGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGETVTE
VVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKPK
ENHKIRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEAWYEMQDLHVTETLPQMVALSEAY
MQIYEQHE
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgggcgcggacgagcaaccatccccgacgcgcaaacgcgaccgcgaggaggaggagctc
gccgacgggggcgccgccgagaagcgcgcgcgcgcggagggcgattcgctgctggggctc
gcgagctacgaggatgacgacgaggaggaagtggccaggggccaggcaaatggtcgtggc
gcagacggggacgcggaggagggcgaggacgatgacgatgaggaggacgatgtgaggagg
gctccggagaggaggccgaggcaggtggagctgcgccgtgactgcccttacctcgacacg
gtgaacagacaggtccttgattttgattttgagaagttctgttcaatctccctgtcgaat
ttgaatgtgtacgcgtgcttggtctgtggaaagtatttccaaggaagaggcttgaaatct
catgcatatactcacagtcttgaagcaggccatcatgtgttcattaatcttcaaaccgag
agggcttactgtcttcctgatggatatgagataaatgatccatcattagaagatattcgg
catgttctcaacccaaggttcacgagagagcaggttctaaatcttgacaagaacaagcag
tggtctagagcacttgatggctccaattatctgcctggaatggttggtcttaacaacatc
aaggagactgattttgtgaatgtcacaatacagtcattaatgagagttactcctcttaga
aatttctttctaatacctgaaaattatcagcatagcaaatcaccattggtccatcgtttt
ggggaattgacacgcaagatttggcatgctaggaacttcaagggccaggttagccctcat
gagtttctgcaagcagttatgaaagcgagtaacaagcgctttcagatcggtgtacagtca
gatcctgtggaatttatgtcatggcttttgaatacactgcatgcgaaactaaaaagctca
aagaagaaaaacagaagcataatacatgattgctttcagggagaacttgaagttgttaaa
gaggttcacaggaagcatataatggaaaaaacggaggatggtgatgagttgaatggtgat
gcaagttcagtggttggaacagatggtattgtcactgaaacatctaaggtgccattcttg
atgctcggtcttgacctaccacctccacctcttttcaaagacgccatggagaaaaatatc
atcccacaggtaccattgtttaacatactgaagaagtttgatggtgagactgtgacagag
gttgtccgtccatccattgctcggatgaggtaccgagtcactagactaccaaagtatctg
atccttcacatgcgacggtttaccaaaaataacttcttcgttgagaaaaaccctactcta
gtaaattttcctgtgaagaacttggaattgaaggattacattccattacccaagcctaaa
gagaatcataagatacgttcgaagtatgaccttatagcgaacattgtccatgacggcaag
ccaggcgaaggatgctacagagtatttgttcagcggaaatcagaagaggcctggtatgag
atgcaggatctccatgttactgagactctccctcagatggtagctctttcagaagcctac
atgcaaatatatgagcagcatgaatga

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