Setaria viridis (green foxtail): 117851587
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Entry
117851587 CDS
T07951
Name
(RefSeq) ABC transporter G family member 42 isoform X2
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117851587
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117851587
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117851587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
AAA_16
AAA_29
AAA_25
AAA_28
AAA
AAA_30
RsgA_GTPase
TIP49
Motif
Other DBs
NCBI-GeneID:
117851587
NCBI-ProteinID:
XP_034589316
LinkDB
All DBs
Position
4:complement(29133555..29143985)
Genome browser
AA seq
1499 aa
AA seq
DB search
MESAMEKVWESGRRMSRSIGRGMGMEAWGVDEAFMPHPWAGSRGGSRGGRSGRDDDEEAL
RWAAIERLPTYNRVRTAILSSSTEAEANDAKPGGKQQFKEVDVRKLDVGDRQEFIERVFR
VADEDNQRFLQKLRNRIDRVGIELPTVEVRFEQLTVEAKCHVGSRALPTLINTARNIAEG
ALGLCGIRLGRQATLTILKDVSGVVRPSRMTLLLGPPSSGKTTLLLALAGKLDPTLRCAG
EVTYNGFALDEFVPQKTAAYISQTDVHVGEMTVKETLDFSARCQGVGTKYDLMTELTRRE
KEAGIRPEPEVDLFMKATSMEGVQSSLQTDYTLRILGLDICADTIVGDQMQRGISGGQKK
RVTTGEMIVGPTKVLFMDEISTGLDSSTTFQIVKCLQQIVHLGEATILMSLLQPAPETFD
LFDDIILLSEGQIVYQGPREYVLEFFESCGFRCPERKGTADFLQEVTSRKDQEQYWADKQ
RPYRYISVPEFAQRFKRFHVGLQLENHLSLPFDKSRCHQAALVFSKHSVSTIELLKASFD
KEWLLIKRNSFVYIFKTIQLIIVALISSTVFLRTHMHQRNVDDGFVYIGALLFSLIVNMF
NGFAELSLAITRLPVFYKHRDLLFYPAWVFTLPNVVLRIPFSIIESIVWVLVTYYTIGFA
PEADRFFKHLLLVFLIQQMAGGLFRATAGLCRSMIIAHTGGALSLLIFFVLGGFLLPKDF
IPKWWIWGYWVSPLMYGFNALAVNEFYAPRWMNKFVLDQSGVPKRLGVSMLEGANIFVDK
NWYWIGAAALLGFTIFFNILFTLSLMYLNPLGKPQAVISEETAEEAEGNGHRTVRNGSTK
SRDGGHSKEMKEMRLSARLSNSSSNGISRIMSVGSNEAAPRRGMVLPFNPLAMSFDNVNY
YVDMPAEMKQQGVQDNRLQLLREVTGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI
EGDIRIAGYPKNQATFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPEMIGDQEITDDI
KIQFVDEVMELVELDNLKDALVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL
DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGQLGRNSQ
KMVEYFEAIPGVPKIKDKYNPATWMLEVSSIAAEVRLKMDFAEYYKTSDLYKQNKVQVNR
LSQPEPGTSDLYFATQYSQSIIGQFKACLWKQWLTYWRSPDYNLVRFFFTLFVALLLGSI
FWRIGTKMGDANTLRIVMGGMYTAVMFVGINNCSTVQPIVSIERTVFYRERAAGMYSALP
YAIAQVVMEIPYVFVQTTYYTLIIYAMMSLQWTAAKFFWFFFISYFSFLYFTFYGMMTVS
ISPNHEVAAIFAAAFYSLFNLFSGFFIPRPRIPRWWIWYYWICPLAWTVYGLIVTQYGDL
EEEISVPGGEKQTISYYVTHHFGYHRNFMPVVAPVLVLFPVFFAFMYAVCIKKLNFQQR
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgcgatggagaaggtatgggagtcggggcggcggatgagccggagcatcggg
cggggcatgggcatggaggcgtggggcgtcgacgaggccttcatgccgcacccgtgggcg
gggtcccgcgggggcagccgcgggggccggagcggccgcgacgacgacgaggaggcgctg
cgctgggccgccatcgagcgcctccccacctacaaccgcgtgcgcaccgccatcctctcc
tcctccacggaggcagaggccaacgatgccaagcccggcggcaagcagcagttcaaggag
gtggacgtgcgcaagctagacgtcggcgaccgccaggagttcatcgagcgcgtcttccgc
gtcgccgacgaggacaaccagcgcttcctacagaagctccgcaaccgcatcgacagggtg
ggcatcgagctgccgacggtggaggtgcggttcgagcagctgacggtggaggccaagtgc
catgtgggcagccgcgcgctgccgacgctgatcaacacggcgcgcaacatcgcggagggc
gccctgggcctctgcggcatccggctggggaggcaggccacgctgaccatcctcaaggac
gtctccggcgtggtccggccgtcgcggatgacgctgctgctcggcccgccgtcctcgggg
aagacgacgctgctgctcgccctcgccggcaagctggacccgacgctccggtgcgccggc
gaggtcacgtacaacgggttcgcgctggacgagttcgtgccccagaagacggcggcgtac
atcagccagaccgacgtgcacgtcggcgagatgacggtcaaggagacgctcgacttctca
gccaggtgccagggcgtcggcacaaaatacgatcttatgaccgagttgacgaggagggag
aaggaggcaggcatccggccggagcctgaagtcgacctcttcatgaaggccacttcaatg
gaaggagtgcagagcagtctccaaacggattacactctcaggatacttgggctggacatc
tgcgctgacaccatcgtcggtgaccagatgcagcgagggatctccggaggccagaagaag
cgtgtcaccacaggagagatgattgttggcccaaccaaggtgctattcatggatgagata
tcaaccggattggacagttccaccacattccaaatcgtcaaatgtctccagcaaattgtg
cacctgggcgaggccaccatcctcatgtccctccttcagcctgcccctgagaccttcgac
ctattcgatgacatcatcctactgtcagaaggccaaattgtttaccagggacctcgcgaa
tacgttctcgagttctttgaatcctgtggattccgctgccctgagcgcaagggtactgca
gactttcttcaggaggtgacatcaaggaaggatcaggagcagtactgggctgacaagcaa
aggccttacagatacatttcggtcccagaatttgcacagcggtttaaacggttccacgtc
gggctccagctagagaaccacctctcactgccgtttgacaagagccgttgccatcaagct
gctcttgtattctcaaaacattcggtgtcaaccatagaacttctcaaggcatcctttgac
aaggagtggctccttatcaagcgcaattcatttgtgtacatcttcaagactatacagctc
atcattgtagccctcatctcgtcaacggtgtttctaaggacccacatgcatcaaaggaat
gtagatgatggctttgtctacattggagcactactctttagtctgatagtcaatatgttc
aatggttttgcggagctctctttggccataacaaggttaccagtgttctacaagcacagg
gacctcctcttttaccctgcttgggtcttcacactaccaaatgtcgttctcagaatccca
ttctccataattgaatctatagtctgggttcttgtcacatactacaccatagggtttgct
ccagaggctgacaggtttttcaagcacttgctgctcgtgtttttgatccagcagatggca
ggtgggctttttagagcaaccgccggactttgcagatccatgatcattgctcacactggt
ggagcactatctcttcttatcttctttgttcttggaggctttctcctgccaaaagatttc
atccctaaatggtggatctggggctattgggtttcacctttaatgtatggatttaatgct
ctagcagtcaatgaattctatgctcctcggtggatgaacaagttcgtactggaccaaagt
ggtgttccgaaaagactaggtgtatctatgcttgaaggcgccaacatctttgttgacaaa
aactggtactggatcggagcagcagctctcttgggtttcaccatcttcttcaatatactt
ttcacactgtcactcatgtatctgaaccctctcggcaagccacaagctgttatatcagaa
gaaactgcagaggaggcggaaggcaatgggcatcggacagtaagaaatggcagcacaaaa
tcaagggacggtggtcatagcaaggaaatgaaggagatgagactgagtgcgcgtctgagc
aactcttcatcaaatgggatttcacgaatcatgtccgttggcagcaatgaagctgctcca
agaagaggaatggttcttccattcaaccctcttgccatgtcttttgataatgtgaactac
tatgtcgacatgcctgcggaaatgaaacaacaaggagtgcaggataacaggctccaatta
ttgcgtgaggttacggggtcattcaggcctggagtgctaacagcacttatgggtgtcagt
ggagctggaaagactactcttatggatgtcttggctggaagaaagactgggggttatatt
gaaggtgatatcagaattgctggctatcccaagaaccaagccacatttgcaaggatttct
ggttactgcgagcaaaatgatatccattctcctcaggtcacagttagggaatctttgata
tattctgccttcttgcgccttcctgaaatgattggagatcaagaaatcactgatgatatc
aagattcaatttgtggatgaagttatggaactagtggagctcgacaatctgaaggatgct
ttagttggcctaccgggaatcacagggctttcaacagagcaaaggaaaaggttaacgata
gctgtggagctcgtcgccaacccatcgatcatcttcatggatgaaccaacatcaggcctt
gatgcaagagctgccgcaattgtcatgcgaacagtgcgaaacacagttgacactggacgg
acagtggtttgcacaatccatcagccaagcattgatatctttgaggcttttgatgagttg
ctattgctgaaaagaggaggccaggtgatctactctggacaattgggtcgcaactcccag
aaaatggttgagtattttgaggcgattcctggagtacctaaaatcaaagataagtacaat
cctgcgacatggatgctcgaagtcagttcaattgctgctgaagtgcgactaaagatggat
tttgctgagtactacaaaacatcagatctgtacaagcaaaacaaggtacaggtgaaccgg
ctgagtcaaccagagccaggaacatcagatctttatttcgccacacagtactctcaatcc
ataataggacagttcaaagcctgcctctggaaacagtggctgacctattggcgcagcccg
gattacaaccttgttagatttttcttcactttgtttgttgccttgctgctcggctccatt
ttttggaggataggcaccaaaatgggagatgcaaacactctcaggattgttatgggagga
atgtacacagctgtgatgtttgttggtatcaacaattgctcaaccgtgcagccaattgtt
tcaattgagaggacagttttctaccgagagagggctgctgggatgtactctgcattgccc
tatgccattgctcaggttgtcatggagatcccctatgtgtttgtccaaacaacttactac
acccttatcatatacgccatgatgagcttacaatggactgctgcaaagttcttctggttc
ttcttcatttcctacttctccttcctctacttcaccttctatggcatgatgactgtctca
atctcaccgaaccatgaggttgcagccatctttgccgcagctttctattcgctcttcaac
ctcttctcaggcttcttcattccaagaccgagaattcccagatggtggatctggtactac
tggatttgcccactggcatggactgtttatgggctcatagtgacacaatacggagacctg
gaagaggaaatctcagtccccggtggagaaaaacagacaatcagttactacgtaacacat
cattttggataccacaggaattttatgccagttgttgcgccggtccttgtgctctttcca
gtgttcttcgcattcatgtacgcagtctgcatcaagaagttgaacttccagcaaagatag
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integrated database retrieval system
