KEGG   Setaria viridis (green foxtail): 117851715
Entry
117851715         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03022  Basal transcription factors
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117851715
  09124 Replication and repair
   03420 Nucleotide excision repair
    117851715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svs03021]
    117851715
   03400 DNA repair and recombination proteins [BR:svs03400]
    117851715
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     117851715
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     117851715
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 117851715
NCBI-ProteinID: XP_034589482
LinkDB
Position
4:complement(4328179..4330511)
AA seq 194 aa
MVLVSGGGGNAWAKEMTIRRKMASIFNKTREHFPTLKDYNDYLEEVEDMTFNLIEGIDVD
AIEAKIARYQKENSEQIVLSRAKRAEDLAAALKASRMNPVKTDADDTDVGSSQGISGGAG
FQGQYAPAAVPGGMGQPRPTGMPPQPIGGRSDPLQGDDEETRRLRAERAARAGGWTIELS
KRRAMEEAFSAIFI
NT seq 585 nt   +upstreamnt  +downstreamnt
atggtgctggtgtccggcggcggggggaatgcgtgggctaaggagatgacgatccgccgc
aagatggccagcatattcaacaagacgcgggaacatttccctactctgaaggactacaac
gattatctggaagaagttgaggatatgactttcaacctgatcgaaggaatagatgtcgat
gcgatcgaagctaaaattgcaagataccagaaagaaaattcagagcagatagtcttgtcc
cgagcaaaaagggctgaagatcttgcggcagcacttaaagcaagcaggatgaaccctgta
aagaccgacgccgacgatacggatgttgggagttcccagggtattagtggtggggcagga
tttcagggccagtatgcgcctgctgctgttcctggtgggatgggtcagcctcgtcccaca
ggtatgccccctcaaccaattggcggtcggtcagatcctcttcaaggagatgacgaggag
accaggagactgcgtgcagagagagcagcacgagcaggcggatggactattgaattgagt
aagaggagagcgatggaggaggcgtttagcgccatattcatctag

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