Setaria viridis (green foxtail): 117851816
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Entry
117851816 CDS
T07951
Name
(RefSeq) soluble starch synthase 2-3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00500
Starch and sucrose metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117851816
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117851816
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
117851816
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Storage polysaccharide
117851816
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Glyco_transf_4
Motif
Other DBs
NCBI-GeneID:
117851816
NCBI-ProteinID:
XP_034589606
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All DBs
Position
4:8624905..8629474
Genome browser
AA seq
773 aa
AA seq
DB search
MSSAAASAAPSAFILAPSSATPGGRRRGAPPFLRGANLNFPFWAPPPPPRGATVVRAEAG
TGGKDDAARPPERRGDADASSRQPRARRKAAVSKRRDPVQPVGRYGSGSGAGNAAATRGA
AASGRNGALAGGEIKSIVATPPASIVKFEGPGYTVILPAQDLAPAPPRTVAPSSKPPLPP
SEEDFVPPPPTSIPKPDTYGNAELAEKKRAQADIGGVPNPIPPPTQPPAPEVQEAAWDFK
KYIGFNDPAEMTGDTGADADGAGSFENYENDDPGPLAGENVMNVIVVAAECSPWCKTGGL
GDVAGALPKALARRGHRVMVVVPRYGDYAEAFDMGIVKYYKAAGQDLEVKYFHAFIDGVD
FVFIDAPLFRHRQGDIYGGNRQEIMKRMILFCKVAVEVPWHVPCGGVCYGDGNLVFIAND
WHTALLPVYLKAYYRDNGQMQYTRSVLVIHNIAHQGRGPVAEYPYMDLPEHYLQHFELYD
PVGGEHANIFAAGLKMADRVVTVSRGYLWELKTVEGGWGLHDIIRSNDWKINGIVNGIDH
QEWNPEVDVHLRSDGYTNYGLRTLDAGKRQCKAALQRELGLEVRDDVPLLGFIGRLDGQK
GVDIIGDAMPWLAGQDVQLVMLGAGRGDLERMLQHLERMHQDKVRGWVGFSVPMAHRITA
GADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVVPFDPFGDAGLGWTFDRAEP
NKLIEALGHCLDTYRNYRESWRRIQERGMSQDLSWDHAAELYEEVLVKAKYQW
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcggccgcgtcggccgctccctcagccttcatcctcgcgccctcctcagcc
accccggggggccgcaggcggggtgccccgccgttcctccgtggggcgaacctgaatttc
ccattctgggcgccgccgccgccacctcggggcgcgacggtggtgcgcgcggaggctggg
accggaggcaaggacgacgcggcgcggccgccggagcggaggggcgacgccgacgccagc
agcaggcagccccgcgcgcggcgcaaggcggcggtctccaaacggagggatcctgttcag
ccggtcggccgttacggctccgggtccggggcggggaacgccgcagccaccaggggcgcc
gccgcgtccggccggaacggcgcgctggcaggcggcgaaatcaagtccatcgtcgccacg
ccgccggcgagcattgtgaagttcgaaggcccgggctacaccgtgatcctccccgcccaa
gaccttgcgccggcgccgcccaggactgtcgccccctcctcgaagccgccgttgccgccg
tctgaggaggactttgtgccgccgccgccaacttccattcccaagcctgacacctatggc
aatgctgaacttgcagagaagaaacgtgcacaggctgatatcggtggagttccaaatcca
attccacctccgactcagccgcctgcgcctgaggtgcaagaggccgcttgggatttcaag
aaatatatcggtttcaacgatcctgccgaaatgacgggtgataccggggctgatgcagat
ggtgctggttcttttgaaaattacgagaacgatgatcctgggcctttggccggggagaat
gtcatgaacgtgatcgtggtggctgctgaatgttctccttggtgcaaaacaggtggtctt
ggagatgttgcgggagctctgcccaaggctttggcaagaagagggcatcgtgttatggtt
gtggtaccaaggtatggggactatgcggaagcctttgacatgggaatcgtgaaatattac
aaagctgcaggacaggacttggaagtgaaatatttccatgcttttatcgatggagtagat
tttgtgttcattgatgcgcctctcttccggcaccgtcaaggtgacatatatggggggaat
agacaggaaattatgaagcgcatgattttgttctgcaaggttgctgttgaggttccttgg
cacgttccatgtggcggtgtgtgctatggtgatggcaatttggtgttcattgctaacgac
tggcacactgcactcctgcctgtttatctgaaagcatattacagagacaatggacaaatg
cagtacactcgctccgttcttgtcatacataacattgctcaccagggtcgcggccctgta
gctgaatacccgtacatggacctgcctgaacactacctccagcacttcgagctgtacgac
cccgtcggcggtgagcacgccaacatcttcgccgcgggtctgaagatggcggaccgggtg
gtcaccgtaagccgcggctacctgtgggagctgaagacggtggaaggcgggtggggcctc
cacgacatcatccggtccaacgactggaagatcaacggcatcgtgaacggcatcgaccac
caggagtggaacccggaggtggacgtgcacctgcggtcggacgggtacaccaactacggc
ctccggacgctggacgccggcaagcggcagtgcaaggcggccctgcagcgggagctcggg
cttgaggtccgcgacgacgtgccgctgctcggtttcatcgggcggctggacgggcagaag
ggcgtggacatcatcggggacgcgatgccgtggctggccgggcaggacgtgcagctggtg
atgctgggcgccgggcgcggcgacctggagcggatgctgcagcacttggagcggatgcac
caagacaaggtgcgcgggtgggtcgggttctcggtgcccatggcgcaccggatcacggcg
ggcgccgacgtgctgctgatgccgtcccggttcgagccctgcggtctgaaccagctgtac
gcgatggcgtacggcaccgtccccgtggtgcacgccgtgggcgggctgcgggacacggtg
gtgcccttcgacccgttcggcgacgccgggctcgggtggacgttcgaccgcgccgagccc
aacaagctgatcgaggcgctcgggcactgcctcgacacgtaccggaactacagggagagc
tggaggcgcatccaggagcgcggtatgtcgcaggaccttagctgggaccacgccgccgag
ctctacgaggaggtcctcgtcaaggccaagtaccagtggtga
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