Setaria viridis (green foxtail): 117851819
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Entry
117851819 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K09422
transcription factor MYB, plant
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117851819
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
117851819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
TFIIA
Motif
Other DBs
NCBI-GeneID:
117851819
NCBI-ProteinID:
XP_034589610
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All DBs
Position
4:10754243..10755738
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AA seq
291 aa
AA seq
DB search
MGRQPCCDKVGVKKGPWTAEEDQKLVGFLLTHGHCCWRIVPKLAGLLRCGKSCRLRWTNY
LRPDLKRGVLSDDEERLVIDLHGQLGNRWSKIAARLPGRTDNEIKNHWNTHIRKKLLRMG
IDPVTHLPLQEAPAPPPQEQQEDQPPPAPQQQQQPPQPQEHHQPRNDSGLMLQDDDAGEE
DLPMFQPHEVATAPPAPPTAAAAAVSNCGSVSSASAGSVSVVSPSCSSSASAPAASGVEA
TEWPEPMYLFGMDDGIIDAGCWDGLFPGGGMGVDPFDGYPGGGFDQDDDWL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcagccgtgctgcgacaaggtgggcgtgaagaagggcccgtggacggcggag
gaggaccagaagctcgtcggcttcctcctcacccacggccactgctgctggcgcatcgtc
cccaagctcgccgggctgctgcggtgcgggaagagctgcaggctgcggtggaccaactac
ctgaggcccgacctcaagaggggcgtcctctccgacgacgaggagcggctcgtcatcgac
ctgcacgggcagctcgggaacaggtggtccaagatcgcggcgcggctgccggggaggacg
gacaacgagatcaagaaccactggaacacccacatccggaagaagctcctccggatgggg
atcgaccccgtcacgcacctcccgctgcaggaggcccccgctcctcctcctcaagagcag
caggaagaccagccgccgccggcgccgcagcagcagcagcagccaccgcagccgcaagaa
caccaccagccgcggaacgacagcgggctcatgctgcaggacgacgacgcgggggaggag
gacctgccgatgttccagccgcacgaggtcgccacggcgccaccagcaccgccgaccgcg
gcggcggcggcggtgagtaactgcggctccgtctcctccgcctccgccggctctgtgtcc
gtggtctcgccgtcctgctcgtcctcggcctcggccccggcggcgtccggcgtggaggcg
acagagtggccggaacccatgtacctgttcggcatggacgacggcatcatagacgccggc
tgctgggacggcctcttccccggcggcggcatgggcgtcgacccgttcgacgggtacccc
ggcggcggcttcgaccaagacgacgactggctgtga
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