Setaria viridis (green foxtail): 117851895
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Entry
117851895 CDS
T07951
Name
(RefSeq) 3-ketoacyl-CoA synthase 5
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00062
Fatty acid elongation
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs04626
Plant-pathogen interaction
Module
svs_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
117851895
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117851895
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
117851895
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Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
HMG_CoA_synt_C
Motif
Other DBs
NCBI-GeneID:
117851895
NCBI-ProteinID:
XP_034589697
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Position
4:complement(10998822..11000567)
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AA seq
482 aa
AA seq
DB search
MSPSPIHKFLKIVYTKTIDNFLLAASVSLTIAAIVVTARSKPHDFTDRIQDLGPSYILSI
GLILATAVTVYIMQRPRMVYLVDYACFRAPHNYRIPSATFVEHARQVSYFSERSVRFMTR
LLERSGLGEETSLPQMASYLEAYKYCTLETAREEAELVVFSAIDDLFAKTSIDPITIDMV
VVNCSGFSPTPSMPDMIVNKYKMRSDIRSIHLSGMGCSAGLISVELAKNLLQTMPQGARA
LVVSTETLTPNYYLGNERAMLLPYCLFRMGGAAVLLSTSPAKARFRLKCIVRTLSAADDK
SYRCIHQEEDDKGNTGANLTMDIIDVSANTLKTNITTIAPLILPASEKLRFALSFVSQKL
LKMRTKLYMPNLLTAFEHICVHAGGRAVIDGIQRSLSLSDEHVEPSRMTLHRFGNTSSSS
LWYELAYIEAKRRMHKGNRVWMIGFGSGFKCNSAVWECIVPAHNEDGPWAGCIHRYPVRI
IP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcccatcaccaattcacaagttcctcaaaatcgtctacacaaagacaatagacaac
ttcctcctagcagcctctgtgtcgctcacaattgcagctatcgtcgtgacggcaagaagc
aagcctcatgatttcactgatagaattcaagaccttggtccttcatacatcttgtcgatt
ggattgatcttggccaccgcagtgactgtgtacatcatgcagcgtccacgcatggtgtac
ctcgtcgactatgcttgcttccgtgccccccataactaccgtataccctccgcaactttt
gttgagcatgcccgccaagtgagctatttcagcgagcgtagtgtccgtttcatgacacgc
cttctcgagagatcgggccttggtgaagagacaagcttgcctcaaatggccagctacctc
gaagcttacaagtactgcacattggagacagctcgtgaggaggctgagcttgtcgtcttc
tcggccatcgatgatctatttgccaagacaagcatcgatccaatcaccattgacatggtt
gtcgtaaactgcagcggatttagcccaacaccatctatgccagatatgattgtaaacaag
tacaagatgcgcagcgacatccggagcatccatctatctggaatggggtgtagtgcaggg
ttaatctcagtagagctcgccaagaacctactgcagaccatgccccaaggtgcacgagca
ttagtcgtatctacagaaaccctgacacccaactactatcttgggaacgagagagctatg
ctgcttccatattgcttgttccgcatgggtggagctgccgtgctgttatcgacatcacct
gcaaaggcccgatttagactcaagtgcatcgtacggacactcagcgcagccgatgataaa
tcatacagatgcattcatcaagaagaggatgacaagggaaacacgggggccaatctcacc
atggacatcatagacgtttctgctaacacactcaaaaccaacatcaccaccattgcgccg
ctcatccttccggcctctgagaaactgcggtttgcactgtccttcgtatcacaaaagctt
ctcaagatgaggacaaagttatacatgcctaacttgctcactgcattcgagcacatttgc
gtccatgcaggtggacgtgcagtgattgatgggatccaacgcagcctaagcctatcagat
gagcatgttgagccatccaggatgacacttcatcgattcggtaacacatccagcagctcc
ttgtggtatgaattggcatacatcgaggccaagcgccgcatgcacaaggggaaccgggtg
tggatgattggatttgggtctgggttcaagtgcaatagtgcagtttgggagtgcatcgtt
cccgcccacaatgaagatggaccttgggctgggtgcatccatcgctacccagtacgtatt
attccttaa
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