Setaria viridis (green foxtail): 117851952
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Entry
117851952 CDS
T07951
Name
(RefSeq) lariat debranching enzyme isoform X1
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117851952
03009 Ribosome biogenesis [BR:
svs03009
]
117851952
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117851952
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
90S particles
RNase
117851952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
117851952
NCBI-ProteinID:
XP_034589791
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All DBs
Position
1:complement(38677637..38684147)
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AA seq
407 aa
AA seq
DB search
MKIAVEGCMHGELDIVYDTLRKLEEAEGIKIDLLLCCGDFQAVRNTDDLRCVNVPLKYRN
MNSFWKYYSGQAVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI
GGLSGIHKQHNYHSGHYERPPYNEQTIRSVYHVRHYDVLKLMHVKEPLDIFLSHDWPLGI
TEYGNWQELIRAKNHFEAEVNNRTLGSKPAAELLNKLKPPYWFSAHLHCRFPAIIQHGEN
GPTTKFLALDKCFRGRNFLQVIDIPSNPGPYEIHYDEEWLAITRRFNSVFPLTRRRFTMR
DEQLDTQDDRQWVRSKLNTRGFKPFDFVQTAPAFNPSNPVSNSSVIGSCRNPQTESFLQL
LELPYLLDSSNSEGVERNESSSQPGNTLGDEDIELPDEDEDAADDDE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcggtggagggttgcatgcatggggagctggacatcgtctacgacacgtta
cggaagctcgaggaggccgaggggatcaagattgacctcctcctttgctgcggagatttc
caggccgttaggaatacagatgatttacggtgtgttaacgtcccactaaagtatcgtaac
atgaactcattttggaagtactactcagggcaagcagttgctccttacccaaccatcttt
atcggtggaaatcatgaagcatccaattatctgtgggaattgtactatggaggatgggca
gcacctaatatatactttttgggatttgctggtgttgttaagtttggaaacatccgaatt
ggtggactgtcaggaatacataagcaacacaattatcactcagggcactacgagaggcct
ccatacaatgaacagactatacggtctgtgtaccatgtaaggcattatgatgttctcaag
ctcatgcatgtgaaggagccactagatatattcttgtcacatgattggcctctgggcatt
actgagtatgggaactggcaggaactcattagggcaaaaaaccactttgaagctgaggtt
aacaatagaacgctaggcagcaaacctgcagctgaattactgaacaaactaaaaccaccc
tactggttttcagcgcatttacactgcaggtttcctgccatcatccaacatggagagaat
ggacctacgacaaagtttcttgcccttgataagtgctttcgtgggcgcaattttctgcag
gttatagacattccatccaatccaggaccatatgaaatccactatgatgaagaatggctt
gcaataacccgaagattcaatagcgttttccccttaactcgaaggcgatttaccatgagg
gatgagcagcttgacactcaagatgaccgacaatgggttcggagcaagttgaacactagg
gggtttaagccatttgattttgtccagaccgcaccagctttcaatccttccaatccagtc
tccaattcctccgttataggaagttgcaggaatccgcaaactgagtcttttctccagctt
ctggaactcccatatctgctggattcatctaactctgaaggggttgaaagaaacgagtca
agctctcagccaggaaacacgcttggtgatgaagatatagaactaccagatgaagatgaa
gatgccgcagacgatgatgagtga
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