Setaria viridis (green foxtail): 117852011
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Entry
117852011 CDS
T07951
Name
(RefSeq) alpha-amylase type A isozyme
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00500
Starch and sucrose metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117852011
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
117852011
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Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
117852011
NCBI-ProteinID:
XP_034589816
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Position
4:39040346..39042476
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AA seq
436 aa
AA seq
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MGMGNRHMCCLSTLLLLLGLSSGQVLFQGFNWESSKQTGGWYNNLMGKVDDIAAAGVTHV
WLPPPSHSVSSEGYMPGRLYDLDASKYGTAAELKSLIAAFHDKGVQAVADIVINHRCADY
KDSRGIYCIFEGGTPDSRLDWRAHMICRDDAKYSDGTGNLDTGADFPGAPDIDHLNDRVQ
RELTEWMLWLKSDLGFDAWRLDFARGYSAEVARVYINGTAPSFVVAEIWDKMVPAGDDGK
PAYDQDPHRQALVDWVDKVGGAASPATVFDFTTKGILNAAVEGELWRLIDTEGKAPGVIG
WWPAKAVTFVDNHDTGSTQAQWPFPHDKVMQGYAYILTHPGNPCIFYDHFFDWGFKDEIA
ALVAVRKRNGITPTSELTILEHDGDAYVAEIDGKVIVKIGSRYDLGHLIPVGFEVATHGK
DYAVWEKGGSEEVTRA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggggatggggaacaggcacatgtgctgcctgtcgaccctgctcctcctcctgggactg
tcatccggccaggtcctgttccaggggttcaactgggagtcgtcgaagcagacgggtggg
tggtacaacaacctgatggggaaggtcgacgacattgctgccgctggcgtcacgcacgtc
tggctcccgccgccgtcccactccgtctccagcgaaggttacatgcctggtcgtctatac
gacctggacgcgtccaagtacgggacggcggcggagctcaagtccctgatcgccgcgttc
cacgacaagggcgtgcaggcggtggcggacatcgtcatcaaccaccggtgcgccgactac
aaggacagccgcggcatctactgcatcttcgagggcggcacacccgacagccgcctcgac
tggcgcgcccacatgatctgccgcgacgacgccaagtactcggacggcacaggcaacctc
gacacgggcgccgacttccccggagcccccgacatcgaccacctcaacgaccgtgtccag
cgggagctcaccgagtggatgctatggctcaagtctgacctaggcttcgacgcatggcgc
ctcgacttcgccaggggctactctgcagaggtcgccagagtctacatcaatggcacggcc
ccgagcttcgtcgtcgccgagatatgggacaagatggtgcctgctggcgacgacgggaag
cccgcgtatgatcaggacccgcaccggcaggcactggtggattgggtggacaaggtgggc
ggagcggcgtcgccggccacggtgttcgacttcaccaccaaggggatcctgaacgccgcc
gtggagggtgagctgtggaggctcatcgacacggaggggaaggcgcccggcgtcatcggg
tggtggccggcgaaggccgtcaccttcgtcgacaaccacgacacgggctccacgcaggcc
caatggccgttcccccacgacaaggtcatgcagggctacgcctacatcctcacgcacccc
ggcaacccatgcattttctatgaccatttcttcgactgggggttcaaggacgagatcgca
gcactggttgcggtgcggaagcgcaatggcatcacgccgacgagcgagctgacgatcctc
gagcatgatggcgacgcctacgtggcggagatcgacggcaaggtgatcgtgaagatcggg
tccaggtacgacctcgggcaccttatcccggtagggtttgaggttgctacccacggcaag
gactacgccgtctgggagaaaggcggcagcgaagaagtgactcgggcatag
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