Setaria viridis (green foxtail): 117852075
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Entry
117852075 CDS
T07951
Name
(RefSeq) cyclic nucleotide-gated ion channel 17
KO
K27629
cyclic nucleotide gated channel 17
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04075
Plant hormone signal transduction
svs04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117852075
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117852075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svs04040
]
117852075
Ion channels [BR:
svs04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117852075
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
117852075
NCBI-ProteinID:
XP_034589894
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Position
4:complement(3292737..3297510)
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AA seq
684 aa
AA seq
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MMFGSRRVEDEMALTRQRTVRFHDERAKATIPIHQKQHGLAASRLGLGSSGKNKIFVAGD
DLWYNKIIDPSSDFILTWTYIFRVSCFIALFMDPLYFYVPIIDYRPTPAGTPTIPCAGKD
RRIAIIVTVFRSIVDLFYAIQIIIKFRTAYINPNSKLGVFGRGDLITDHKEIAKQYLRSD
FAVDLVASLPLPQIIIWSVIPAIKYSSSEHGNDMLLLVALFQYILRLYLMISLNNKIVKI
TGVFAKTAWQGAAYNLLLYMIASHVLGALWYLLSVDRQFACWKKYCNETEIRYLYCGVIP
DPSWNGTLVFSRCNASSKPDFDFGMFQPLLYNETPNQSFLKKYVYCLWWGLQNLSCYGQT
LTVSTFLGETLYAIFLAMVGLVLFAHLIGKVQTYLQSITARVEEWRIKQKDTEEWMRHRQ
LPHELRERVRRFIHYKWLATRGVDEESILIALPADLRRDIKRHLCLDLVRRVPLFSQMDD
QLLDAICERLVSSLSTEGTYIVREGDLVTEMLFIIRGKLESSTTDGGRTGFFNSITLKPG
EFCGEELLEWALVPKPTVNLPSSTRTVKAILEVEAFALRAEDLRFVASQFRRLHSRKLQH
TFRYYSHHWKTWAACFIQHAWRRHKRRKMAKDLRMRESFSSMRSYEGHGSPEQNFTLRRG
VSIIKELPKFRKPSEPDFSAEHDD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcggttcgaggagggtggaggacgagatggcgctcacgaggcagcggaccgtc
agattccatgatgagagggcaaaggcaactatacccattcaccagaaacagcatgggctg
gctgctagcaggcttggcttgggaagttcagggaaaaacaagatttttgtggcaggagat
gacttgtggtacaacaagattattgacccatcaagcgacttcatcttgacatggacctac
atcttccgtgtgtcatgcttcattgctctgttcatggatcctctgtatttctatgtgcct
ataatcgattacaggccaactcctgctggcacaccaaccattccttgtgctgggaaggat
agacgcatagccatcatcgttactgtcttccgatcaattgttgatctcttttatgccatc
cagataataataaagttcaggaccgcttatattaatccaaactcaaaattaggggttttt
ggtcgaggagatctcatcacagatcataaggaaattgcaaagcagtatttaagatctgac
tttgcagttgatttagtggcttcattgcctttaccacagatcattatttggtctgtgata
ccagctatcaaatattcgtcgtctgagcatggcaatgacatgctgcttctggttgctctt
ttccagtatatcctacgattatacctcatgatttccttgaataataaaatagtcaaaatt
actggagtttttgcaaagactgcctggcaaggagctgcatacaatctgctgttatacatg
attgctagccatgttttaggagcactatggtaccttctatccgttgatcgccagttcgca
tgttggaaaaaatattgcaatgagactgaaattcggtatctgtattgtggtgtaatacca
gatcctagttggaacggaaccttagtcttttctagatgtaatgctagtagcaaacccgat
tttgactttggtatgttccagccactgttatacaacgaaactcctaatcagagcttcctg
aagaaatatgtctattgcctttggtggggcttgcagaatctaagttgctatggccaaaca
ttgactgtgagtacctttcttggggagacactgtatgctatattcttggcgatggtcggt
cttgtcttgtttgcgcatttgattggaaaagtccagacctacctgcaatcaatcactgca
agggttgaggaatggagaataaagcagaaagatactgaggagtggatgagacatcggcaa
ctaccccatgaattgcgggaaagagtgagaagatttattcattacaagtggctggcaact
cgaggtgtggatgaagaatctatattgattgctctgcctgcagatcttcgccgtgacatt
aagcgccacctgtgcctggatcttgttcgtcgggtcccacttttctcccagatggacgat
caacttctagatgccatctgtgagcgtcttgtatcttccttgagcacagagggtacatat
attgtccgtgaaggtgacctggtgactgagatgctctttatcattcgtggtaagctggaa
agttccactacagatggtggtcggacgggtttcttcaattcaatcaccctcaaacctggt
gaattctgcggcgaagagctcctcgaatgggctctagttcccaagcctactgtcaacctg
ccatcatccactcggacggtgaaggcaatcctcgaagttgaggcatttgctctccgagct
gaggacctcaggtttgtcgccagccaattcaggcgcctccacagcaggaagctgcaacac
actttccggtactactctcaccattggaagacatgggccgcgtgctttatccagcatgct
tggcgccgccacaagaggaggaagatggccaaggacctgagaatgagggaatcattctcc
tccatgaggtcatacgaaggccatggctcccccgaacagaatttcacgcttaggagagga
gtaagcatcatcaaagaattgcctaagttcaggaaaccatcggagccagatttctcagca
gagcatgatgactga
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