Setaria viridis (green foxtail): 117852322
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Entry
117852322 CDS
T07951
Name
(RefSeq) alpha-amylase type A isozyme
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00500
Starch and sucrose metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117852322
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
117852322
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
117852322
NCBI-ProteinID:
XP_034590247
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Position
4:complement(30607175..30609616)
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AA seq
433 aa
AA seq
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MGSMPLCCLSTLLLLLGLASGQVLFQAFNWESWKQSGGWYNLLMGKVDDIAAAGVTHVWL
PPPAHSVSAQGYMPGRLYDLDASKYGTAAELRSLIAAFHGKGVQAVADIVINHRCADYKD
SRGIYCVFEGGTNDSRLDWGPHMICRDDTQYSDGTGNLDTGASFAAAPDIDHLNDRVRRE
LAEWLLWLRSDLGFDAWRLDFAKGYSAEVARAYIDATAPSFAVAEIWSDMAYGGDGKPEY
DQDPHRQALVDWVDKVGGAASPATVFDFTTKGILNAAVEGELWRLIDPRGKAPGVIGWWP
AKAVTFVDNHDTGSTQAVWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGFKDEIAALM
AVRKRNGITATSELTILVYDGDAYVAEIDGKVIMKIGSRYDVSAFIPAGYQVVAHGNDYA
VWEKGAKEEVAQA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggggagcatgccactgtgctgcctgtcgaccctgctcctcctcctggggctggcatcc
ggccaggtcctcttccaggcgttcaactgggagtcgtggaagcagagcggcgggtggtac
aacctcctgatggggaaggtcgacgacatcgccgccgccggcgtcacccacgtctggctg
ccgccgccggcgcactccgtctccgcccaaggttacatgcctggtcgtctatacgacctg
gacgcgtccaagtacgggacggcggcggagctcagatccctgatcgccgcgttccacggc
aagggcgtccaggcggtggcggacatcgtcatcaaccaccggtgcgccgactacaaggac
tcccgcggcatctactgcgtcttcgagggcggcaccaacgacagccgcctggactggggc
ccccacatgatctgccgcgacgacacccagtactcggacggcacgggcaacctcgacacc
ggtgccagcttcgccgccgccccggacatcgaccacctcaacgaccgcgtccggcgcgag
ctcgccgagtggctgctctggctcaggtcggacctcggcttcgacgcatggcgcctcgac
ttcgccaaggggtactccgccgaggtcgccagggcgtacatcgacgccacggccccgagc
ttcgccgtcgccgagatatggagcgacatggcgtacggcggggacggtaagccggagtac
gaccaggacccgcaccggcaggcgctggtggactgggtggacaaggtcggcggcgcggcg
tcgccggccacagtgttcgacttcaccaccaaggggatcctgaacgccgccgtggagggc
gagctgtggcggctcatcgacccgcgggggaaggctcccggcgtgatcgggtggtggccg
gcgaaggccgtcacgttcgtcgacaaccatgacaccggctccacgcaggccgtgtggccg
ttcccctccgacaaggtgatgcagggctacgcctacatcctcacgcaccccggcaaccca
tgcattttctacgaccatttcttcgactggggtttcaaggatgagatcgcggcgctaatg
gcggtgcggaagcgcaacggcatcacggcgacaagtgagttgacgatcctcgtgtacgac
ggcgacgcctacgtggcagagatcgacggcaaggtgatcatgaagatcggttctaggtac
gatgtcagcgcgttcatccctgccgggtaccaggtcgtcgcgcacggcaacgactacgct
gtctgggagaaaggagccaaggaagaagtggctcaagcataa
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