Setaria viridis (green foxtail): 117852337
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Entry
117852337 CDS
T07951
Name
(RefSeq) T-complex protein 1 subunit alpha
KO
K09493
T-complex protein 1 subunit alpha
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svs03110
]
117852337
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
svs03037
]
117852337
04147 Exosome [BR:
svs04147
]
117852337
Chaperones and folding catalysts [BR:
svs03110
]
Heat shock proteins
HSP60 / Chaperonin
117852337
Cilium and associated proteins [BR:
svs03037
]
Primary cilia and associated proteins
BBS-CCT complex
117852337
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117852337
Exosomal proteins of colorectal cancer cells
117852337
Exosomal proteins of bladder cancer cells
117852337
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TPP_enzyme_M
SCAB_CC
Motif
Other DBs
NCBI-GeneID:
117852337
NCBI-ProteinID:
XP_034590274
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Position
4:complement(3941566..3947339)
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AA seq
545 aa
AA seq
DB search
MAITATTPDILGERQSGQDVRTQNVMACGAVANIVKSSLGPVGLDKMLVDDIGDVTITND
GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVKNKIHPTSI
ISGYRLAMREACKYVEEKLSVKVDKLGKDSLINSAKTSMSSKLITTDSDFFAAMVVEAVQ
GVKITNAKGEVKYPIKSINILKAHGKSAKDSYLLNGYALNTGRAAQGMPTRVTPARIACL
DFNLQKTKMQLGVQVLVTDPRELEKIRQRESDITKERIEKILKAGANVVLTTKGIDDMSL
KYFVEAGAIAVRRVRKEDLRHVAKATGATMVTTFADMEGEETFDPSFLGHADEVVEERIA
DDDVILVKGTKNTSAVSIILRGANDFMLDEIERSLHDALCIVKRTLESNMVVAGGGAVEA
ALSVYLENLATTLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTK
ADKQHFSSMGLDLSKGIIRNNLEYGVIEPAMSKVKIIQFATEAAITILRIDDMIKLTKDE
GNEEE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaccgcgacgacgcccgacatcctcggcgagcgccagtccggacaggacgtg
cgcacccagaatgtgatggcgtgcggggcagtggccaacatcgtcaaatcctcgctcggt
cccgtcggtctcgacaagatgctagtggatgacattggtgatgttacaatcactaatgat
ggagcaaccatactgaagatgttggaagttgagcacccagctgctaaggttcttgttgag
ttggctgagctccaagaccgtgaggtaggagatgggacaacttcagttgtcatcatagca
gcagagttgctcaagagaggcaatgatcttgtgaagaataagatccatccaacctctata
atcagtggctacaggcttgctatgcgtgaagcctgcaaatatgttgaggaaaagttgtca
gtcaaggttgataaacttggaaaagactcccttatcaattctgcaaaaactagcatgtct
tcaaaattgatcactactgacagtgatttctttgctgctatggttgttgaggcagttcaa
ggtgtgaagattacaaatgccaagggagaagtgaagtatccaatcaagagcatcaatatt
ttgaaagctcatggtaaaagtgccaaggatagttacctgctgaatgggtatgcactaaac
acaggccgtgcagctcaaggaatgcctactagagtgactcctgctagaattgcttgtctt
gattttaaccttcagaagacaaaaatgcaacttggtgtccaagttcttgtaactgatcca
agggaacttgagaagattcgtcaaagagaatctgacataacaaaggagcgaattgagaaa
attctcaaggctggagctaatgttgtattgaccaccaagggaattgatgatatgtccttg
aagtactttgttgaggctggagcaattgcagtaaggcgcgtgcgcaaggaagatttgcgc
catgttgccaaagccactggtgcaactatggttactacttttgcggacatggaaggcgaa
gaaacatttgatccatcatttcttggacatgcggatgaagttgtggaggaaagaattgct
gacgatgatgttattctggtgaaaggcactaagaacaccagcgcggtgtccataatactt
agaggtgcaaatgacttcatgcttgatgagattgagcggtccttacatgatgccttgtgc
attgtgaagagaaccctggagtcaaatatggttgttgctggtggcggtgcagttgaagct
gcgttgtcagtttacttggagaaccttgcaacaaccctgggatctcgggaacaattggcg
attgctgaattcgctgaatctttgttaatcatacctaaggtactatctgttaatgctgcg
aaagatgcaactgagcttgtagcaaaacttagggcatatcatcatactgctcaaacaaag
gctgacaagcaacatttctcaagcatgggtcttgacttgtctaagggcatcattcgcaac
aaccttgagtatggtgtgatagaaccggcgatgagcaaagtaaaaattattcagtttgcg
actgaggcagccattactatcctcaggattgacgacatgatcaagcttaccaaggatgag
ggtaacgaagaggagtaa
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