Setaria viridis (green foxtail): 117852377
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Entry
117852377 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03231
elongation factor 1-alpha
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117852377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117852377
03016 Transfer RNA biogenesis [BR:
svs03016
]
117852377
03012 Translation factors [BR:
svs03012
]
117852377
04131 Membrane trafficking [BR:
svs04131
]
117852377
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117852377
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117852377
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117852377
Translation factors [BR:
svs03012
]
Eukaryotic type
Elongation factors
117852377
Membrane trafficking [BR:
svs04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117852377
Exosome [BR:
svs04147
]
Exosomal proteins
Proteins found in most exosomes
117852377
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
DUF1618
MMR_HSR1
GTP_EFTU_D4
EF-G_D2
AAA_22
Motif
Other DBs
NCBI-GeneID:
117852377
NCBI-ProteinID:
XP_034590333
LinkDB
All DBs
Position
4:39192434..39197451
Genome browser
AA seq
877 aa
AA seq
DB search
MGNEKVHISIVVIGHVDSGKSTTTGHLMYKLGGIDKSVIDRTEKEADEMNKRSFRYAWVL
DKLKAERERGITIDIALRKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLVIDSMA
GSFEAGISTDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKDRYNEIVEKVSLLLNR
IGYNQEKILFVPISGFNGDNLIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLRD
VYKLGAIGTVPVGRVASGIIKPGMVVTFGPSGLTTEVKSLEMHHEALQEAFPGDIVGFNV
KNVAVKDLKRGYVASNSNEDPAKEAASFTSRVIIMDHPGHITSGYAPVLDCHTSHIAVKF
AELISKIDRRSSKELEKEPKFLKKGDGGMVKMIPTKPMVVETFSEYPPLGRFVMRDMKQT
VAVGVIKSVQKKEYSLPPEGLCGEIINRKQLNSDTETGGAPSTDDETPTALEDRHPWILL
SAAVVRGSPTDKGRCIAFSPNGYMVSASLSIAKPPQESICRVYSSARIAKVELVCAQFPY
IIFGVDFADLGRRSIIQSMDWFVLLTDAAGSPDSLFSLPKLVVSLPRSYSSVFGILPKLI
LASVSLSSDYLSYDLQMYSTDGGWRTLNVRKPHGSAAVRPEYAVKLGNGHILWVDLKNGM
LICDASSVQPELRYIPLPYRTFAHRVIAHRVSGYQKFAPCTYWGVGSSDGILKFCEIHNA
FYASLDLPEIDYDVDIIEDGSNNNRCIDFPLPSYSVSTWRIVTWSREVDGSSWSNRCIID
AKDLTMPQGEHLSFIGRYTTFISFAMDDLNVVYLKSAARIGDVNGLMLAVDLEKRTVENL
GVFKSPDSSKRFPYGLEASPVWSLTSEEDRDAEVTEA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgagaaagttcacattagtattgtggtcatcggccatgtggactctggcaag
tcgaccaccactggccacctgatgtacaagcttggaggtattgataagagtgtgattgac
agaacagagaaagaagcagatgaaatgaacaagaggtcgttcaggtacgcctgggtgctt
gacaagctcaaggctgagcgtgagagaggtatcaccatcgatattgctctgaggaagttt
gagaccaccaagtactactgcactgtcattgatgcccctggacaccgcgactttatcaag
aacatgattactggtacctcccaggctgactgtgctgtccttgttattgactctatggct
ggtagttttgaggctggtatctccacggatggccagacccgtgagcatgctctccttgct
ttcacccttggagtgaagcagatgatctgctgctgcaacaagatggatgccaccactccc
aagtactcgaaagatcgctacaacgagatagtggagaaagtctctttacttctcaatcgt
attggctacaatcaggaaaagattctttttgtgcccatatctggtttcaatggtgataac
ttgattgagaggtccaccaatcttgactggtacaagggcccaacgctgcttgaggctctt
gacttgatcaatgagcctaagaggccttcagacaaacccctgcgtctcccccttcgagat
gtgtacaagcttggtgctattggaactgttccagttggccgtgtagccagtggtattata
aagcctggtatggttgtcacctttggtcccagtggcctgactactgaggtgaagtctcta
gagatgcaccatgaggcgctccaggaggcctttcctggtgacattgttgggttcaacgtt
aagaacgttgctgtgaaggatctcaagcgtggttatgttgcctcaaactccaatgaggac
cctgcaaaggaggctgccagcttcacctcccgggtcatcatcatggaccaccctggccat
atcacaagcggctatgccccagtgctggactgccacacctctcacattgctgtcaagttt
gccgagctcatttcaaagatcgacaggcggtcttccaaggagcttgagaaggagcccaag
ttcttgaaaaagggtgatggtggtatggtgaagatgattcccaccaagcccatggttgtt
gagaccttctctgagtaccctcctcttggtcgcttcgtcatgcgcgatatgaagcaaaca
gttgctgttggtgtcatcaagagcgtgcagaagaaggaatattcccttccaccagaaggg
ctttgtggcgaaattataaatagaaagcagctcaatagtgacacagagactggaggtgct
ccctcaacagatgatgaaactcctacagctttagaagacaggcatccttggattttactc
tcagctgcggtggtacgtggttcccccacggataaaggcagatgcattgcattctctcca
aatggttatatggtcagtgcatcgctaagcattgccaagccaccacaagaatcaatctgt
cgtgtatactccagcgcaaggatagcgaaagtcgaattggtttgcgcacagttcccctac
attatcttcggtgtcgatttcgctgacttaggcagaagaagtataatccaaagcatggac
tggtttgtactgttgactgatgctgctggcagtcctgattcactatttagtctgccaaaa
cttgttgtgtcactacccagatcatactcaagtgtgtttggcattctgccaaaactaatt
cttgcttcggtgtcgctgtcctctgattacctctcatatgatctgcaaatgtattcaaca
gatggtggctggagaactcttaatgtgcgcaagccccatggcagtgcagcagttcgacca
gaatacgcagtcaagctgggtaatggtcacattctatgggttgatctaaagaatggaatg
ctaatatgtgatgcatcctcagtgcagcctgaactgcgatacatccctttgccatataga
acttttgcccaccgtgtgattgcccatcgtgtgagtggctatcagaagtttgctccatgc
acgtattggggagttggatcatctgatggaatactgaagttttgtgagattcacaatgcc
ttctatgcatctctagacttgcctgaaatagattatgatgttgatatcattgaagatggt
agcaacaataacaggtgtattgattttccccttccaagttactcagtctctacttggaga
atcgtgacctggtcacgtgaggttgatggctcttcctggtccaacagatgtatcattgat
gctaaggatctcacaatgccccagggagagcatttgtcctttataggaaggtacactact
ttcatttcctttgctatggatgatttgaatgtggtctacctgaaatctgctgcacggatt
ggagatgtgaacgggctaatgctggctgttgatctggagaagagaacagttgaaaacctt
ggagtattcaaatccccagacagctcgaaaaggttcccctatggccttgaggctagccct
gtttggagcttgacttcagaggaagacagggatgctgaagttactgaagcatga
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