Setaria viridis (green foxtail): 117852450
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Entry
117852450 CDS
T07951
Name
(RefSeq) probable protein transport Sec1b
KO
K15292
syntaxin-binding protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117852450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117852450
Membrane trafficking [BR:
svs04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117852450
SNARE
SNARE associated proteins
Syntaxin-binding proteins
117852450
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117852450
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF3982
Motif
Other DBs
NCBI-GeneID:
117852450
NCBI-ProteinID:
XP_034590446
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Position
4:complement(1707920..1715892)
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AA seq
655 aa
AA seq
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MSMDFGAPADDPKVFRNICRDRILKDLLKPDKDKETKSSWKVLIMDKFTVKIMGYACKMA
EITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSP
IPKELVTYIKNDSSVIPRIGALREMNLEFFTIDMQGFVTDHDTALNDLYGRSENNSKVFN
DTISTMATRIATTFASLKEFPCVRYRAPKGDASTTTKFDMVPKWLATAVWDIVSKYKSSI
PEFPQKETCELLIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGTKYTYEVSKAGSEPEQKE
AVLEDHDPLWLELRHTHIADASERLYEKMNNFVSKNKAAQLHSRDGGEISTRDLQKIVQA
LPQYSDQVEKLTLHIEIAGKINRFIREYGLRDIGQLEQDLVFGDAGAKEVISILRSKQDM
SPENKLRLLIIYAIIYPEKFEGDKGEKLMQLAKLPHDDMDVIKCLRYLEGSDFKKSSRTG
TFSLKFDAQKKKNAARTEKQDGEETWALSRFFPLIEELIEKLSKGELPLKEYPSMSEPSS
APQGTTQTASTAAPAQNPQPMSMRSRRTPTWAKSRNSGDSQSSDSSVLRHSSGDFKRLGN
RIFVFMIGGATRSELRTVHKLTTKLKREIVLGSSSIDDPPQFISKLKSIGSANNN
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggacttcggcgccccggcggatgaccccaaggtcttccgcaacatctgccgc
gaccggatactgaaggacttgctgaagccggacaaggataaggagaccaaaagctcatgg
aaggttcttataatggataaatttacagtgaagatcatgggttatgcttgcaagatggcg
gaaattacagatgcagggatttcgttggtcgaagatctgttcaagagaagggagccgatg
ccttccatggatgctatctactttctgcagccactaaaagaaaatgtcataatgcttctt
tccgatatgtctgggagatgtccattgtacaggaaggcatacatcttctttagctcaccg
attcctaaagagctggtaacttatataaagaatgacagcagtgtaataccacgcattggt
gcactacgggagatgaatttggaattctttactattgacatgcagggcttcgtaaccgac
catgatacggcgctgaatgatttatatggccgaagtgaaaataactccaaagtgttcaac
gatactataagcacgatggcaactcgcattgcgaccacatttgcttcattgaaagaattt
ccatgtgtgcggtatcgggccccaaaaggagatgcttctacaacaactaaatttgacatg
gttccaaagtggcttgctactgctgtttgggatattgtgtcaaaatataaatcatcaatt
cctgaatttccccagaaggagacatgtgaactgctcattgttgacaggcctatagatcag
atagcacctgttattcatgaatggacctatgatgcaatgtgccacgatctactcgaaatg
gatggtaccaaatacacatacgaggtatcaaaggcgggttcggaacctgaacaaaaggag
gctgtattggaggatcatgatcctctttggcttgagcttcgccatactcacatagctgac
gctagtgagagattgtatgaaaagatgaataattttgtttccaagaataaagcagcgcaa
ctacattcaagagatggtggtgaaatctcaacaagggatctgcagaaaattgttcaagct
ttgcctcaatatagtgatcaagttgagaaactgactctacatatagagattgctggaaaa
attaacaggtttatcagggaatatgggctgcgtgacatcgggcagttagagcaggacctg
gtttttggagatgcaggagcaaaggaggtgatcagcatccttaggtcaaagcaggatatg
agtccagaaaacaaactgaggttgctgattatatatgcaatcatatatccagaaaagttt
gaaggtgacaaaggcgaaaagttgatgcagctagcaaagcttccacatgatgatatggat
gtaattaagtgtttaagatacttggaaggctcagattttaaaaagtcatcaaggactggt
actttctctctaaaattcgatgcgcaaaagaagaaaaatgctgccaggacagaaaaacag
gatggggaggaaacatgggcattatcacgatttttcccacttattgaggagctaattgag
aaactgagcaaaggtgaattacctctgaaagaatacccatctatgagcgagccaagttct
gctccccaaggtaccactcaaactgcatcaacggcagcacccgcacaaaacccacagcca
atgtctatgagatcaaggcggacaccaacatgggcaaagtctaggaactccggcgattct
caatcaagtgattcctcagtcttgaggcactcatctggtgacttcaaaaggctaggcaac
cggattttcgtcttcatgattggtggagccactagatccgaactgcgcacagtgcacaag
cttacaacgaaattgaagcgtgaaatcgttttgggctcttctagcatcgacgatcctccg
cagtttatttcgaagctgaagtcgataggtagcgccaataacaactag
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