Setaria viridis (green foxtail): 117852494
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Entry
117852494 CDS
T07951
Name
(RefSeq) glycerophosphodiester phosphodiesterase GDPD1, chloroplastic
KO
K18696
glycerophosphodiester phosphodiesterase [EC:
3.1.4.46
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117852494
Enzymes [BR:
svs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.46 glycerophosphodiester phosphodiesterase
117852494
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Motif
Pfam:
GDPD
RIG-I_C
Motif
Other DBs
NCBI-GeneID:
117852494
NCBI-ProteinID:
XP_034590496
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Position
1:24447708..24451380
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AA seq
385 aa
AA seq
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MAQLKAARVADVPNLDVVAPGLVVAAGESDAAAIAAAGKRGPAGGGGGRFSVIGHRGKGM
NALASADRRLQEVRENTVRSFNDAARFPVDYVEFDVQVTKDGCPIIFHDNFIYTEEDGKI
SQKRVTDLQLEDFVQYGPQNEKGKIGKPLLRKMKDGRIINWNVQSEDALCTLQEAFEKVN
TRLGFNVELKFDDNLEYQEEELTRILQAILKVIFEHAKDRPILFSSFQPDAALLMRKLQS
KYPVYFLTNGGTEIYIDVRRNSLEEAIKLCLSSGLQGIVSEARGIFRHPAAIPKIKEANL
SLLTYGTLNNVPEAVYMQHLMGVNGVIVDLVPEITEAVSELIALPEPDPEVESLSNNQAA
KGTATPNFSQREISFLLRLIPELVQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctcaaggccgcgcgcgtcgccgacgtgcccaacctggacgtggtggccccc
ggcctggtggtcgcggccggcgagtcggacgccgccgcgatcgcggcggcggggaagcgc
ggcccggcgggcggcggcggcggccggttctccgtgatcgggcaccgcgggaaggggatg
aacgcgctggcgtccgcggaccggcggctgcaggaggtccgcgagaacaccgtccgctcc
ttcaacgacgccgcgcgcttccccgtcgactacgtcgagttcgacgtccaggtcaccaag
gatgggtgcccaatcatcttccatgacaacttcatctacactgaagaagatggtaaaatt
tcacagaagcgtgtcactgatcttcagttggaagacttcgtccagtatggaccacaaaat
gagaaggggaagattgggaagcccctgcttcgcaaaatgaaggacggtagaatcatcaac
tggaatgtgcagtcagaggatgctctttgcacgcttcaagaagcattcgagaaggtcaac
actagattgggcttcaacgttgagctgaaattcgatgacaatcttgaataccaggaggaa
gagctaactcgcatcctccaggccatcctgaaggtgatctttgagcacgccaaagatagg
cctatacttttctctagcttccagcccgatgctgcgctgctcatgcgaaaattgcagagc
aaataccctgtctactttttgacgaacggagggacagagatttacattgacgtgaggagg
aactcgttggaggaggccatcaagctatgccttagcagtggcctgcaagggatagtttct
gaggcccgtggaatattcaggcaccctgctgccataccaaagatcaaagaggctaacctc
tccctgctgacctacggaacattgaataacgtgccagaagcggtgtacatgcagcacctg
atgggggtgaacggggtgatcgtcgacctggtgccagagatcactgaggccgtctccgag
ctcatcgccctgccggagcctgacccggaagtggagagcttgagcaacaaccaggctgct
aaaggcactgcaacaccaaatttctcgcaacgcgagatctcattcctgctgaggcttatc
cctgagcttgtccaataa
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