Setaria viridis (green foxtail): 117852549
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Entry
117852549 CDS
T07951
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117852549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117852549
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
117852549
Transfer RNA biogenesis [BR:
svs03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117852549
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Motif
Other DBs
NCBI-GeneID:
117852549
NCBI-ProteinID:
XP_034590563
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Position
4:302740..315821
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AA seq
1070 aa
AA seq
DB search
MAPPPSLHSPVAACRHQALLTPSAFPPPSPARFSTRHRRRPRLPLSSAPAAADGDASSAV
SAANQWGSPTSSVLTFQQAIQRLQEYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEP
WNVAYVEPSIRPDDSRYGDNPNRLQRHTQFQVILKPDPGNSQDLFLHSLSAIGINVREHD
IRFVEDNWESPVLGAWGLGWEVWMDGMEITQFTYFQQSGSLPLQPVSVEITYGLERILMS
LQGVDHFKNIQYTEGITYGELFLENEKEMSAYYLEHADVDRIQNNFDDFEEEARSLLSLG
LPIPAYDQVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVETRKNLGHPLG
TYEEANLIYPHVSEKPNREGVTGQPRTFVLEIGTEELPPRDVVEATEQLEKSVVNTLEKR
RLSHGEVHSYGTPRRLAIVVENLSMKQTEVEVELRGPPVAKAFDQDGNPTKAAEGFCRKN
NVSVDCLYRRIDGKTEYIYARVRESARFADEVLTEDIPTIISGISFPKSMRWNSNIVFSR
PIRWILALHGDFVVPFSFAGISSGNSSCGLRNSSVANFKVETAESYLSAVEKAGLLIDMQ
ERKERVLRDSTILAKGVGGDFIAPDSLLQEVVNLVEAPMPILGQYDDSFLELPKDVLITV
MQKHQKYFAVTSKSTGNLLPYFIAVANGAIKEEVVRRGNEAVLRARYEDAKFFYKMDTQK
KFSEFRGQLNGILFHEKLGTMLDKMTRVENIVSELTLILGINEGMIPIIKDAAALAMSDL
ATSIVTEFTSLAGVMARHYALRDGIPEEIAEALFEIALPRFSGDVFPRTDAGIVLAVADR
LDSLVGLFGAGCQPSSTNDPFGLRRVSYGLVQILVENKKSFDLRRALTLMAEVQPIDIDI
DVIDEAVQFVTRRLEQLLVDEGINCEIVRSVLMERANCPYLAAQTATEMEAFSRTETFPK
IVEAYSRPTRIIRGKEIESALEVDPSVFEKDEEKVLWDAYLEVADKIHPGVDIKTFADAS
LLLIQPLEDFFNNVFVMAEDERIRNNRLALLRKIESLPKGIAELSVLPGF
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggctcctccaccttccctccactcccccgtcgccgcttgccgccaccaggcgctgcta
acgccctccgcctttcctcctccaagccccgcccgcttctctactcgccaccgccgacgc
cctcgcctccctctatcttctgctcctgccgccgcagacggcgacgcctcctccgctgtg
tccgccgccaaccaatggggatcccccacctcctccgtcctcactttccagcaggccatc
cagcgcctccaggagtattgggcctccgtaggatgcgctgtcatgcagtgtagcaacacc
gaggttggagcgggcaccatgaatcctttgacgtttcttagggtcttaggtcctgagccg
tggaacgtcgcgtatgtggagccaagtataagaccagatgatagccgctacggagacaat
cccaataggcttcaacgccatactcagtttcaggtaattttgaagcctgatcctggaaat
tcgcaagatctcttcctgcacagcctttcagcaataggtattaatgtccgtgaacatgac
atccgttttgttgaagacaactgggagagtccggttcttggtgcttggggactgggctgg
gaggtttggatggatggcatggaaatcacacagttcacatattttcagcagtcaggaagc
cttccgttgcagccggtttctgttgaaataacatatggacttgaacgtatcctcatgtca
cttcagggagttgatcatttcaagaatatacaatacactgaaggcattacatatggagaa
ctattccttgagaatgagaaggagatgagtgcgtattatttagagcatgcggatgtcgat
cgcattcaaaacaacttcgacgattttgaagaagaggctcgctccttgttatcactgggg
ctgccaattccagcgtacgatcaggttctgaaggcctctcacgctttcaatattttagac
tctagaggttttgttggtgtaactgagcgtgcaagatattttggtcgcatgcgaagtctt
gctcgtcaatgtgctcagctttgggtggaaactcgaaaaaaccttgggcatccgttgggt
acttatgaagaggctaaccttatctatcctcatgtctctgaaaagcctaatagagaggga
gtgacagggcagccacggacatttgttcttgaaataggaacagaagagttgccaccccgt
gatgtcgtagaagcaaccgaacagcttgagaaatctgtagttaatacattggagaaacgt
agattgagccatggagaagtgcactcttatgggacaccaaggagattagcgattgttgtt
gaaaaccttagtatgaagcaaacagaggtagaggttgaactacgcggtccaccagttgcg
aaggcatttgaccaagatggaaaccccactaaggccgctgagggattttgtcgaaagaat
aatgtttctgtagattgtttatatagaagaatagatggtaaaacagaatatatctatgct
cgagtcagagagtctgctcgttttgctgatgaggtcctaactgaagatattcctactatt
atttctggtatttcgtttcccaagtcaatgcgctggaactccaatattgtttttagtcgt
ccaatacgctggatcttggcacttcacggagattttgttgtgccattttcttttgctggt
atctcaagtgggaattcatcatgtggccttcgtaactcttctgtggctaattttaaggtg
gaaactgcagaatcatatttatctgctgtggaaaaagctgggctcctgattgatatgcag
gagcgcaaggaaagagtcttgcgtgactctactatattggctaaaggtgtcggtggagat
ttcattgcacctgatagtttgctgcaggaggttgtcaatcttgtggaggcgcctatgccc
atccttggtcaatatgatgattccttcttagaacttccgaaagatgtactgattacagtt
atgcagaaacaccagaagtatttcgctgtaacctccaagtccacaggcaatctgctacca
tattttattgctgttgccaatggtgccattaaagaggaagttgtccgcagaggcaatgaa
gctgttctcagggcaaggtatgaggatgccaaattcttttataagatggatacacaaaag
aaattttctgaattccgaggccagcttaatggtattctttttcatgaaaaacttggcaca
atgctcgataaaatgacacgcgttgaaaatattgtttctgaattgacccttattctcgga
ataaatgagggaatgatcccaattatcaaagatgcagctgcgttggccatgtcagatctt
gccacttctattgtgacggaatttacttcacttgctggagttatggcacgccattatgct
ttgagagatggcattcctgaagagattgcagaagcactatttgagatagcacttcctcgg
ttttcgggtgatgtgtttccaagaacagatgctggcatagtccttgcggttgctgataga
ttagatagcctagttggtttgtttggagctggatgtcagccaagttctacgaacgatcca
tttggacttcgaagggtctcttatggactggttcaaatattggttgagaacaagaagagc
tttgatctcaggagagccctcaccttgatggcagaggtgcaacccatagatatagatatt
gatgttatagatgaggcagtacaatttgtcacgaggagactggagcagcttctggtggat
gagggaattaactgcgagatagtccgttcagtgcttatggagcgtgcaaactgcccctat
ctagcggcacaaacagcaactgaaatggaagcattttcaagaacggaaacatttccaaaa
attgttgaagcgtattcaaggccaacaagaatcatacgtggaaaagaaattgagtccgct
ttggaggtggacccaagtgtatttgagaaagatgaagaaaaagttttgtgggacgcttac
ttggaggttgctgacaagatccatcctggtgttgatattaaaacctttgctgatgcttct
ctgctcttgatacaacccctagaagatttcttcaataatgttttcgtcatggcggaagac
gagagaattcgcaacaaccggctggcgctgctgagaaagattgagagtttgcccaaggga
atcgcagagctgtcagttttacctgggttttag
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