Setaria viridis (green foxtail): 117852630
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Entry
117852630 CDS
T07951
Name
(RefSeq) adagio-like protein 1
KO
K12115
clock-associated PAS protein ZTL
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
117852630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117852630
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117852630
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_1
Kelch_6
PAS_9
F-box-like
NANM
PAS_3
F-box
PAS
F-box_5
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
117852630
NCBI-ProteinID:
XP_034590698
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Position
4:36812131..36817032
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AA seq
631 aa
AA seq
DB search
MEWDSESDGAGSVGAGEEEEQEKEEAEAEVGVSGGGGDGGAGGMFTFAIEGMLRASGPCG
LVVTDALEPDCPIIYVNRGFEDATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAAMVSN
IRRCIDNGTEFRGDLLNFRKDGSPLMNRLHLTPIYGDDATITHYMGIQFFTNANVDLGPL
PGSITKEPVRSTRFAPDNSFRPISTGPGESNFCREYSSIFQLTDEVLCQSILSRLSPRDI
ASVSSVCRRMYHLTRNEDLWRMVCQNAWGSETTQALETVPAARRLGWGRLARELTTLEAV
AWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHINV
SAAPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFMLDLDAKQPTWREIPGVAPPVPRS
WHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDRPVWREVPASWKPPSRLGHSMSVY
GGRKILMFGGLAKSGPLRLRSSDVYTMDLSEEEPCWRCLTGSGMPGAGNPAGAGPPPRLD
HVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVV
GGTKAIVLGGQTGEEWMLTEIHELSLASNTV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggacagcgagtccgacggcgccggcagcgtcggcgccggcgaggaggaggag
caggagaaggaagaggcggaggcggaggtgggagtctcgggcggcgggggagatggaggc
gccggcgggatgttcacgttcgcgatcgagggcatgctgcgggcgtccgggccgtgcggg
ctggtcgtcaccgacgcgctcgagcccgactgccccatcatctacgtcaaccgcggcttc
gaggacgccaccggataccgcgccgaggaggtgctcggcaggaactgccggttcctgcaa
tgtaggggaccatttgctcaaaggaggcaccccctagtcgatgcagcaatggtttcaaat
attcgaagatgcatagacaacggtactgagttccgcggtgatttactaaatttcaggaag
gatggctctccattgatgaacaggttgcatctgacccctatatatggagatgatgcaacc
ataacccactatatgggcattcagttcttcactaatgctaatgttgatctgggaccattg
cctggctctataacaaaggaacccgtgagatcaacacggtttgctccagataactcattt
cgacccatatccacgggaccaggggagagcaatttctgtcgggaatattctagcatcttc
caattgacggatgaagtgctttgccaaagtatactgtcaaggttgtcaccaagagatata
gcatctgtgagctctgtgtgcaggcgcatgtatcacttaacaagaaatgaagatctttgg
agaatggtttgccagaatgcttggggcagtgagactactcaagctcttgagacagtgcct
gctgcaagaagattgggctggggtcggctggcaagagaactgaccactctggaagctgtt
gcctggaggaaattgacagttgggggtgcagtggagccatctcgatgcaatttcagtgcc
tgtgctgtagggaaccgtgttgttctctttggtggggaaggtgtaaacatgcaaccaatg
aatgatacatttgtattggatttaaatgccagcaatccagagtggaggcatatcaatgta
agcgcagctcctccaggtcgctggggccatacactgtcatgtttaaatggatcttggttg
gttgttttcggtggatgtggaaggcagggtctgcttaacgatgtattcatgctggatttg
gatgcaaaacaaccaacctggcgtgagatacctggagttgcaccccctgttccacgctct
tggcacagttcctgcactttggatgggacaaagttggtagtttctggtggctgtgctgat
tcaggtgtactgctcagtgacacatatcttctcgatgtaaccatggacaggccagtttgg
agagaggtacctgcatcttggaagccaccttccagactggggcactcaatgtctgtctat
ggtggcaggaaaatcctgatgtttggcggtcttgcaaagagtggccctctgcgactccgg
tctagtgatgtgtacacaatggacttaagtgaagaagagccttgctggcgatgcctcact
gggagtggaatgcctggggctggaaatccagctggggcaggtccacctcctcgccttgat
catgttgcggttagcctgcctggtggaaggattttgatatttggtggctcagttgcaggt
cttcactcagcgtcacagctgtatctgttggatcctactgaagaaaagcctacttggaga
atactgaatgttccagggcgtcctcccaggtttgcctggggccacagcacttgtgtcgtt
ggaggaacaaaagcgatagtgcttggtggacaaactggagaagagtggatgcttacagaa
atacatgagctttctctggcaagcaacaccgtttga
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