Setaria viridis (green foxtail): 117852636
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Entry
117852636 CDS
T07951
Name
(RefSeq) chaperone protein ClpD1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svs03110
]
117852636
Chaperones and folding catalysts [BR:
svs03110
]
Heat shock proteins
HSP100
117852636
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_22
Sigma54_activat
AAA_16
nSTAND3
NBD_SMAX1
AAA_14
AAA_7
IstB_IS21
NACHT
AAA_18
TniB
Zeta_toxin
Torsin
Motif
Other DBs
NCBI-GeneID:
117852636
NCBI-ProteinID:
XP_034590712
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All DBs
Position
1:25340128..25345326
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AA seq
942 aa
AA seq
DB search
MEVCCCSTSSSVLAGGRGGAARRLAAPAAARWGAAGFGTRAVVLAHPLPRPASSARPAPR
RARRGLIRAVFERFTERAVKAVVLSQREARGLGEAAVAPRHLFLGLVAEDRSSGGYLSSG
IGIERAREECRGIGARDVDAPPPPPPKTGSGLDTDVPFSAASKQVFEVAVVLSKNMGSSF
ISPEHLAIALFTLDDPTTNNLLRSLGADPSQLSSVAVDRLQAELAKDGRDPAGASSFKIP
EKAPAAAGRSAFSQSLTKKKGKGALDQFCLDLTTQASGGFIDPIIGREEEIERVVQIICR
RTKNNPILLGEAGVGKTAIAEGLALRIANGDVPIYLVAKRILSLDVGLLIAGAKERGELE
SRVTNIIREVREAGDVILFIDEVHNLIGSGTVGKGKGSSLDIGNLLKPALARGELQCIAA
TTLDEHRMHFEKDKALARRFQPVLVAEPSQEDAVKILLGLREKYETYHKCRFTLEAINAA
VYLSARYIPDRQLPDKAIDLIDEAGSRARMESFNRKKEGQSSILLKSPDEYWQEIRAAQA
MHEVVLSNKEKYSPNANDQESGNADVEAPYEDNRGSTSTSSLSADEPIVVGTEEIARVAS
LWSGIPVQQLTADDKKLLVGLDDELRKRVIGQDDAVVAISRAVKRSRVGLNDPDRPIATL
LFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPGYIGYGETGT
LTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVG
STSISKGRRSIGFLKEDTESSSYVAMKSLVMEELKAFFRPELLNRIDEMVVFRPLEKTQM
LAILDIILKEVKGRLLALGIGLEVSDAMKDLICQEGYDKSYGARPLRRAVTHMIEDVISE
AILFGEFKPGNTILMDIDAEGKPCMSHLDQQIVQVTDPTRAF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtgctgctgctcgacctcgtcgtcggtcctcgcggggggccgcgggggcgcg
gcacggaggctggccgccccggcggcggcgcggtggggcgcggcggggttcgggacgagg
gcggtggtgctggcgcacccgctcccgcgcccggcgtcgtccgcgaggccggccccgcgg
cgggcgcggaggggcctgatcagggcggtgttcgagcgcttcacggagcgggccgtcaag
gcggtcgtgctgtcgcagcgggaggcccgggggctcggggaggccgccgtggcgccgcgc
cacctcttcctcggcctcgtcgcggaggaccgctcgtccggcgggtacctctcgtcgggg
attggcatcgagcgcgcgcgggaggagtgccgcggcatcggcgccagggacgtggacgcg
ccgccgccgccgccgcccaagaccggatcggggctcgacaccgacgtgcccttctccgcg
gccagcaagcaggtcttcgaggtcgccgtcgtgctgtcaaagaacatggggtccagcttc
atctcgccggagcacctcgccatcgcgctcttcaccctcgacgatcccaccaccaacaac
ctcctcaggagtttgggagcagatccgagtcagctttcatcagttgcagtcgaccgtctc
caagcagagcttgcgaaagatggaagagatcccgcaggagcatcatctttcaaaatccca
gagaaggctcctgcagcagctggaagatctgctttctcccaatccttgactaaaaagaaa
gggaagggtgcactagatcagttttgtttggatttgaccacacaagctagtggaggtttc
atcgatcctattattggccgtgaagaggagattgaaagagtggttcagataatatgccga
cggacgaagaacaatcctattcttttgggtgaggcaggagttggcaaaactgcaattgct
gagggactggctcttcgaattgcaaatggcgatgtccccatttatcttgtggcaaagcgt
atattgtcactggatgttggtctacttatcgctggtgcaaaagagaggggtgaattggag
tctagggttactaatataattcgtgaagtccgggaagcaggcgatgttattctttttatt
gatgaggttcacaatcttattggatctggaaccgttgggaagggtaagggttctagcctt
gatattggcaacttgctgaaacccgcgcttgctagaggtgaactgcagtgcattgcagca
acaactctagatgaacaccgaatgcattttgagaaggataaggctttggcccgccgcttc
cagccagtattagtagctgagcctagtcaggaagatgctgtgaagatattgcttggtctt
cgtgagaaatacgaaacgtaccataaatgcagattcacattagaagccatcaatgcagca
gtttatctatcagcaagatatatccctgacagacagcttcctgataaggctattgatcta
attgacgaggctggaagtagagctcggatggagtcatttaacaggaagaaggaagggcag
tcttcaattctcttgaagtcaccagatgaatattggcaagagataagagctgcacaggcc
atgcatgaagtggtgttatctaacaaggaaaaatattctccaaatgcgaatgatcaagag
agtggtaatgctgatgttgaagcaccatatgaagacaatagagggtcaacatcaacctca
tcactctcagctgatgagccaattgtagttgggacagaggaaattgcaagagttgcctca
ttatggtcagggataccagttcagcagttgactgctgatgataaaaagcttctagtagga
ctagatgatgagctcaggaaacgggtcattggccaagatgatgcagttgtggccatatct
cgtgcagtgaagagatcgcgtgttggccttaatgaccctgacagacctattgctacactg
cttttctgtggtccaacaggagttggtaaaacggagcttaccaaggctctagcagcaagt
tattttggatcagaatctgctatgcttagattagacatgagcgagtatatggagaggcac
actgtgagcaagctgatcggctctcctccagggtacattggatatggtgaaactggtact
ttgacagaagcggtcaggaggaaaccatttactgtggttttgctggatgagatagagaaa
gcccaccctgatattttcaacatccttctccaaatctttgaggatggacatttgacagac
tcacagggccgcagggtttccttcaagaatacattgattgtgatgacgtccaatgttggt
tctacatcaatttcaaagggaagacggagcataggtttcttgaaggaagatactgagtca
agctcatatgtcgcaatgaaatccctagtaatggaagagctgaaggcatttttccgacca
gagttgctcaacagaattgatgagatggtcgtgttccgtcctctagagaagactcagatg
ctggccattcttgatatcatcctgaaggaagtgaagggcaggcttttggcccttgggata
ggcttggaggtgtctgatgcaatgaaggacctgatctgccaagaggggtacgacaagagt
tacggtgcgcggccgctgcggagggctgtcacccacatgattgaggatgtcatcagcgaa
gcgattcttttcggcgaattcaagcccggcaacaccatactgatggacattgatgccgag
gggaagccgtgcatgagccatctggaccaacagatcgtccaggtcactgacccaacacgg
gcattctga
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