Setaria viridis (green foxtail): 117852643
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Entry
117852643 CDS
T07951
Name
(RefSeq) transcription factor GAMYB
KO
K09422
transcription factor MYB, plant
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117852643
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
117852643
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Rap1_C
Motif
Other DBs
NCBI-GeneID:
117852643
NCBI-ProteinID:
XP_034590716
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Position
4:33976634..33981527
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AA seq
542 aa
AA seq
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MTVKVEQDPALELPPNTEAGAGAEFSQPLSSGKEEEENDDDEDDETDSVGYDGAGNGGGA
PQLKKGPWTPEEDKRLKDYVEAHGEGNWNQVQRNAGLNRCGKSCRLRWANHLRPDLKKGP
FDAEEVDKIIKFHMMWGNKWAKMASHLPGRTDNEIKNYWNTRLKRHQRANLPLYPEHLCS
RVLDQDMNRHIPDESRGKKRSNELTQEKVVGMDDLVGDLMVFQHLDYGKDPVVPTNPLKR
HASTGDLSYVQSLDKVENFYSNDLNYVLTKSQSVPLGSATANGYPIFDGNPSTSGTIHRS
KKTGLPSFQCSSYEFSNSWLLQCPTASLIEQQLDTCIQSPESMSSQNTGLLGEIVNKGDA
LDDCTKSERLFEMVFPPLGYNIVSQSNAYPMRHPSSSVIGDCEPEACLFDEIQASNSPSA
GSDAIFAYGKCYPDASFSDARMPGTSLEAGFLNDDPLSKDQSYPYLSSSLFDADSSQEPK
LLTDAGQWLDSFAWKSMPGACNMPDFPGISSSLLGNQGYGQHILEEPKNDLLQQPRLPTG
FN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgaaggtggagcaggaccccgcgctggagctgccgcccaacactgaggccggg
gccggggcggagttctcgcagccgctgtcgtccggcaaggaggaggaggagaacgacgac
gatgaggacgacgagaccgacagcgtggggtacgacggagcggggaacggcggcggcgcg
ccccagctgaagaaggggccctggacgcccgaggaggacaagcgcctcaaggactacgtc
gaggcgcacggcgaggggaactggaaccaggtgcagcggaacgcggggctcaaccgctgc
ggcaagagctgccgcctccgctgggccaaccacctcaggcccgacctcaagaaggggccc
ttcgacgcggaagaggttgataagatcatcaagttccacatgatgtgggggaacaagtgg
gctaagatggcgtcccatttgcctggacgcaccgataacgaaattaaaaattactggaat
actagattgaagaggcatcagcgagctaatttgcctctctatccagaacatttgtgttct
cgggttctggatcaagacatgaaccgtcacattcctgatgagtcacgtggcaagaaacga
tcaaacgagttaacgcaggaaaaagttgttggtatggatgatcttgtgggtgatcttatg
gtatttcagcaccttgactatggtaaggatccagtggttccaacaaaccctttgaagcgc
cacgcgtctactggtgatctgtcatatgtgcaatctcttgacaaggtggagaacttttat
tccaatgatttgaactatgtattgacaaagagtcagtcggtgcctcttggtagtgccact
gccaatggctatccaatatttgatggcaatccctctacttctgggaccatacacaggtcc
aagaagacagggctcccttcattccaatgttccagctatgaatttagtaatagctggttg
cttcaatgccccacggcttctcttattgaacaacagcttgacacctgtattcaatctcca
gagtccatgtcttcacaaaacactggtctgctgggtgaaattgttaacaagggtgatgca
ctagatgactgtacaaagtctgaaagattgtttgaaatggtgtttcctcctcttggatac
aatatagtttcacaatcaaatgcttaccctatgaggcatccttcctcttcagtcattggt
gactgtgaacctgaggcctgtcttttcgatgaaattcaagcttcaaactcaccttcggca
ggttctgatgctattttcgcttacggcaaatgttatccagatgctagtttttctgatgct
aggatgcctggtacatcattagaagcaggtttcttaaatgatgatccactctcgaaggac
cagtcctatccctacctgtcaagttcactttttgatgcggattcttctcaagagcctaag
ctgttaactgatgcaggccaatggcttgattctttcgcctggaaaagcatgccaggtgca
tgtaacatgcctgactttccaggtatcagcagttctctattgggcaatcagggctatggc
caacacatattagaggaaccaaagaacgatcttttgcaacaaccacgattgcctacaggg
ttcaattaa
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