Setaria viridis (green foxtail): 117852649
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Entry
117852649 CDS
T07951
Name
(RefSeq) phytoene synthase 1, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00906
Carotenoid biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117852649
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
svs01006
]
117852649
Enzymes [BR:
svs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
117852649
Prenyltransferases [BR:
svs01006
]
Terpene biosynthesis
Squalene/phytoene synthase
117852649
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
L_lactis_ph-MCP
Motif
Other DBs
NCBI-GeneID:
117852649
NCBI-ProteinID:
XP_034590730
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Position
4:complement(39746737..39750165)
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AA seq
415 aa
AA seq
DB search
MAIILVRAASPGLSDAAHHGSGSGSLGQCSSLLKRRRRWMLCSLRYACLGLGPGEREIGR
APAVYSSLAVNPAGEAVVSSEQKVYDVVMKQAALLKRQLRTPVPLDVSRPRDLEMPRNGL
REAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTAL
DRWEKRLEDLFEGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKARYKNFDELY
MYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDARRGRV
YLPQDELAQAGLSDEDILNGVVTNRWRKFMKQQIKRARMFFEEAERGVTELSQASRWPVW
ASLLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAYGKSLLLPCSLRNSQT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggccatcatccttgtacgagcagcgtcgcccgggctctccgacgccgcccaccatggg
agcgggagcgggagcctcggccagtgctcctccctgctcaagaggcggcgccgctggatg
ctctgctcgctccggtacgcctgcctcggcctgggcccgggggagagggagattggccgg
gcccccgctgtgtactccagcctggccgtaaacccggcgggagaggccgtcgtctcctcc
gagcagaaggtctacgacgtcgtgatgaagcaggccgcattgctcaagcgccagctgcgc
acgcccgtccctcttgacgtcagcaggccccgggacctggagatgccgcgcaacggcctc
agggaggcctacgcccgctgcggagagatctgcgaggagtatgccaagacattttacctc
ggaactttgctgatgacagaggagcggcgccgcgccatatgggccatctatgtgtggtgt
aggaggacggatgagctcgtggatgggccaaacgccaactacattacgccgacagccttg
gaccggtgggagaagagacttgaggatctattcgagggacgcccttacgatatgcttgat
gccgctctttctgataccatctcaaggttccccatagacattcagcccttcagggacatg
attgaagggatgcggagcgaccttagaaaggcaaggtataagaactttgacgagctctac
atgtactgctactatgttgctggaactgtgggattaatgagtgtacctgtgatgggcatc
gcacctgagtctaaggcaacaactgaaagcgtgtatagtgctgccttggctcttggaatt
gcgaaccaactcacaaatatactacgggatgtaggagaggatgctagaagaggaagggtg
tatttaccacaagatgaactggcacaggcagggctctctgatgaggacatcctcaatggt
gtcgtcacaaaccgatggagaaaattcatgaagcagcagatcaagagggccaggatgttt
tttgaggaggcggaaagaggggtgactgagctctcacaagctagcagatggccagtatgg
gcctcactactgttgtaccggcaaatcctggatgagattgaagcaaacgactacaacaac
ttcacaaagagggcgtatgtaggcaaagggaagaaattgctagcactgcctgttgcatac
gggaaatcgctactgctgccatgctcactgagaaatagccagacctag
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