Setaria viridis (green foxtail): 117852716
Help
Entry
117852716 CDS
T07951
Name
(RefSeq) EIN3-binding F-box protein 1
KO
K14515
EIN3-binding F-box protein
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04016
MAPK signaling pathway - plant
svs04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
117852716
04075 Plant hormone signal transduction
117852716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117852716
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117852716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_At5g56370
LRR_RPS2
F-box-like
LRR_At1g61320_AtMIF1
F-box
Motif
Other DBs
NCBI-GeneID:
117852716
NCBI-ProteinID:
XP_034590816
LinkDB
All DBs
Position
4:complement(33925449..33928309)
Genome browser
AA seq
628 aa
AA seq
DB search
MSPFQGYRGDGALAGVRSRKRVFASAAAEPAVTAAPKRQKRREEPSLDALPDECLFEVLR
RVRGARARCASACVSRRWLALLAGIRASEAVLAPPAPAVPDLNQEYLGGEDDDEADLMDH
DSDARERTLEGKEATDARLTAAAVAGRLSAVSVRGSHPARGVTDAGVSALARGCPALRSL
SLWDVPQVTDAGLAEIAAECHALERLDITGCPLVTDKALIAVAQGCPELKSLTIEACSGV
ANEGLKAIGRSCTKLQAVNIKNCAHVDDQGVSGLVCSATASLAKVRLQGLSITDASLAVI
GYYGKAITDLTLARLPAVGERGFWVMANAMGLQKLRCMTVTSCPGLTDLALASVAKFSPS
LKLVNLKKCSKVSDGCLKEFAESARVLENLQIEECNKVTLMGILAFLLNCSPKFKALSLV
KCIGIKDICSAPAQLPVCKSLRSLTIKDCPGFTDASLAMVGMICPQLENVNLSGLGAVTD
NGFLPLIKSSESGLVNVDLNGCENLTDAAVSALVKAHGASLAHLSLEGCSRITDASLFAI
SESCSQLAELDLSNCMVSDYGVAVLAAAKQLKLRILSLSGCMKVTQKSVPFLGSMSSSLE
GLNLQFNFIGNHNIASLEKQLWRCDILA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgttccagggatacagaggtgatggcgctctcgccggcgtccggtcgcggaag
cgcgtgttcgcgtcggcggccgctgagcccgccgtgacggccgcgcccaagcggcagaag
cggagggaggagccgtccctggacgcgctcccggacgagtgcctcttcgaggtcctccgc
cgcgtgcggggcgcccgcgcgcgctgcgcctcggcctgcgtctcccgccgctggctcgcg
ctcctcgcaggcatccgcgcctccgaggccgtgctcgccccgcccgcccccgccgtgccg
gacctcaaccaggagtacctcggcggcgaggacgacgacgaggccgacctcatggaccac
gacagcgacgcccgcgagaggaccctcgagggcaaggaggccacggacgcgcgcctcacg
gcggcggccgtcgccggccgcctttccgccgtctccgtccgcgggagccacccggcgcgc
ggcgtcactgacgccggcgtctccgcgctcgcccgcggctgcccggccctccggtccctt
tccctgtgggatgttccacaggtgacggacgccgggctcgccgagatcgccgccgagtgc
cacgcgctggagcggcttgacatcactggttgcccgctggtcacggacaaggccctcatt
gccgtcgctcaggggtgcccggagttgaagtcgttgaccatcgaggcgtgctctggtgtt
gccaacgagggtctcaaggcaattggccggagctgcacgaagctgcaggcggtgaacatc
aagaactgcgctcatgttgatgatcagggtgtgtctggcctcgtctgctccgcaaccgct
tcattggccaaggtccggctccagggtctgagcattactgatgcttctctcgcggtgatt
gggtactatgggaaggcaatcacagacctcaccctcgctcgcctcccagcagttggtgag
aggggattttgggtgatggccaatgccatgggccttcagaagctcagatgtatgactgtc
acctcctgcccgggactcacggatcttgctcttgcatctgttgccaagttcagcccaagt
ttgaagcttgttaacctcaagaagtgcagcaaggtctcagatggttgcctcaaggaattc
gccgaatcagcaagggttctggagaacctgcagattgaggaatgcaacaaggttactctc
atgggcattcttgctttcctcctcaactgcagcccgaagtttaaggctctctctttggtc
aaatgcattgggatcaaggacatctgctctgcacctgcacagcttccagtatgcaagtcg
cttcgctccctgaccatcaaggattgcccgggtttcacagatgccagcttggccatggtg
ggcatgatctgccctcagttggagaatgtcaatttgagcggccttggtgcagtcaccgac
aatggcttccttccattgatcaagagttccgagagcgggctggtcaatgttgatttgaat
ggctgtgagaatctcacagatgcagctgtttctgccttggtgaaggcacatggtgcttct
cttgcacaccttagccttgagggctgcagtaggattactgatgcaagcctgtttgcaatc
tctgagagctgcagccagcttgctgagcttgatctttcaaactgcatggtcagcgactat
ggtgttgcagtcttggcggcagcaaagcagctcaagcttcgcatcctctcactttctggt
tgcatgaaggtcacccagaagagtgttcctttcttaggcagcatgtcttcatccttggaa
ggactcaatctccagttcaacttcatcggcaaccacaacatcgcctcactggagaagcag
ctctggcggtgcgacatccttgcttag
DBGET
integrated database retrieval system