KEGG   Setaria viridis (green foxtail): 117852960
Entry
117852960         CDS       T07951                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svs03400]
    117852960
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    117852960
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 Prok-RING_4 zf-C3HC4_4 DEAD RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 117852960
NCBI-ProteinID: XP_034591175
LinkDB
Position
1:25422242..25429836
AA seq 1026 aa
MGKERDREEQVAMVRAVLGDGMPEMDIIRALHMAADDPTKAINILLDFDHKPPPPPLPPT
PSPSPSPPPGKPAKTLAESTPPSKAPARPKPTAEKPKAAPVPATTNGAGAATGENWWLVG
SAEMAGLSTCKGRRIAPGDAVTFSFPNAAAAASAAGKSRSGRPSLASCSSEIMRFSTPNH
GEVGRIPNEWARCLLPLLKENKIKVQGSCKSAPEALSIMDTVLLSVSVYINSSMFRDQKQ
SLPKAARVAPEDSTFYPLPALFKLIGLAPFKKAAFTPEDLYSRKRPIETKSSIGAPATKL
RSENLRLSSTGNEDDHGEETVSDSDLDGIIGISDSSALEEKDPPDSLLCDLRPYQKQALH
WMLQLEKGSSSQDAATTLHPCWEAYRLEDKRELVLYLNVFSGDATTEFPSTLQLSRGGIL
ADAMGLGKTIMTIAVLLSDSNKGCITTQNTARISVEASGLGESQDAVKKLANPFSFSKHK
TPKGPLIGGGNLIICPMTLISQWKAEIEAHTKPGAVNVYVYYGQNRPKEASFIGQSDIVL
TTYGVVSSEFSIDGSTENGALYSIHWFRIVLDEAHMIKSSKSLISLAAAALTADRRWCLT
GTPIQNNLEDLYSLFRFLRVEPWRNWALWNKLVQKPYEEGDERGLKLVQSILKPIMLRRT
KNSTDKEGRPILNLPPANIEVKYCDLSEAEKDFYEALFRRSKVKFDQFVEQGKVLHNYAS
ILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGGNGPVNGDSCLPSRAYIEEV
VQELQKGEGECPICLEAFEDAVLTPCAHRLCRECLLSSWQSATAGLCPVCRKSMSKQDLI
TAPTDSRFQVDVDKNWVESSKISALLQELEVLRSSGAKSIVFSQWTAFLDLLQIPLSRNN
ISFARLDGTLNLQQREKVIKEFSEDRGILVLLMSLKAGGVGINLTAASNAFVMDPWWNPA
VEEQAVMRIHRIGQTKTVSIKRFIVKGTVEERMEAVQARKQRMISGALTDQEVRTARIEE
LKMLFS
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggggaaggagagggatcgggaggagcaggtggccatggtgcgcgctgtgctcggcgac
ggcatgccggagatggacatcatccgcgcgctccatatggccgccgacgaccccaccaag
gccatcaacatcctcctcgacttcgaccacaagccgcccccgcctcctctcccgccgacg
ccgtcgccgtcgccgtcgcctccgccggggaagcccgccaaaaccctcgccgagtcaacc
ccaccaagcaaagcccctgcccggcccaagcccacggcagagaaacctaaggcagcgcct
gtgccggcgacaaccaatggcgctggcgccgccaccggcgagaactggtggctggttggg
agcgccgagatggcagggctgtccacctgcaagggcaggaggattgcccccggggatgcg
gtcaccttctccttccccaacgccgcggcggccgcctccgccgcggggaagagccgttcc
ggccgcccctccctcgcttcctgctcctccgagatcatgcgcttctccaccccgaaccac
ggggaggttggtcgcatccccaacgagtgggcgcggtgcctgcttcccctactcaaggag
aacaagataaaagtccagggctcctgcaaatcagctcccgaggcgcttagcattatggac
actgtcctcttgtcagtgagtgtatatatcaacagctcaatgtttcgtgatcaaaagcaa
tcgttgcccaaggcagctcgggttgctccagaggactccacattttaccccctacctgca
cttttcaaattgattgggcttgctccttttaaaaaggctgcatttactccagaagacctt
tattccaggaagcgaccaattgaaacaaagagcagtattggagcacctgccacaaagttg
agatccgagaatttgagattatcttctactggaaatgaagatgatcatggtgaagaaact
gtttcagattcagatttggatggtataattgggatctcagacagctctgcactggaggaa
aaggatccccctgattctctgctgtgtgatctacgcccttatcaaaagcaggcccttcat
tggatgctgcagcttgagaaaggcagttcttcccaggatgcagctacaacccttcaccct
tgttgggaagcatacagacttgaggacaagagggagctagttttgtacttgaatgtattt
tcaggtgatgctacaactgaatttcctagcacattacaactttccagaggagggattctg
gcagatgcaatgggactggggaagactattatgacaatagctgttcttctttccgattct
aacaaaggatgcatcacaactcagaatactgcacggatctctgtagaagccagtgggttg
ggtgaatcgcaagatgctgtgaagaagcttgctaaccctttttcttttagcaagcataag
acacctaagggcccacttattggaggtggcaatctaattatctgcccgatgacacttatt
agtcagtggaaggcagagatagaagctcatactaagccaggcgctgtgaatgtatacgtt
tattatggacaaaacaggccaaaggaagcaagctttattggtcagagtgatattgtcctg
actacatacggtgttgtgtcatcagaattttcaatcgatggttcaacggaaaatggggct
ttgtactcgatacattggttcagaattgtgcttgatgaagcacacatgataaaatcttct
aaaagtttgatatccctagctgcggctgctctgactgctgatcggcgctggtgtctcact
ggtacaccaattcagaacaatctggaggatttatacagccttttccggtttctgagagtt
gaaccatggaggaactgggctttgtggaataaacttgtacaaaaaccatatgaagaaggt
gatgaaagaggattaaagctggtgcagtccattttgaagccaattatgttgagaaggact
aaaaatagcacagacaaggagggcagaccaatccttaatttaccccctgcaaatattgaa
gtaaaatattgtgatttatcagaggctgagaaggatttctatgaagctctgtttcggaga
tctaaggtaaaatttgatcaatttgtggagcaaggaaaggttctgcacaactatgcttca
attctggagttacttttgcgccttcgtcaatgctgtgaccatccattccttgttatgagt
cgtggggatacacaggagtttgcagacctaaacaagcttgcaaagcgtttcctgcgtggt
ggtaatggtcctgttaatggggattcttgccttccctctagagcttacatcgaagaggtt
gtccaagaattgcaaaaaggtgaaggggagtgtcctatttgcctggaagcctttgaggat
gctgtattaactccctgtgctcaccgtttgtgccgagagtgtctcttatctagttggcag
agtgcaacagcaggtctttgccctgtctgtaggaagtcgatgagcaagcaagatcttata
actgctccaactgatagccgctttcaagttgatgttgataaaaactgggttgaatcttcc
aagatatctgctctactgcaggagttggaagttcttcgcagttcaggtgccaagagtatc
gtgtttagccagtggactgcatttttagatctgttgcaaattcctctttctaggaataac
atctcatttgctaggctggatgggacgttgaatcttcagcaaagagagaaagtaatcaag
gagttctctgaggacagaggcattttggttctgcttatgtctctgaaggctggtggtgtt
ggtatcaaccttactgctgcatctaatgcgtttgtcatggacccttggtggaatcctgct
gttgaggaacaagctgtcatgcgcatccatcgaattggtcaaacaaagactgtttctatc
aaaagattcattgtgaagggcactgtcgaagaacgaatggaagccgtgcaggcgcgtaag
cagcgaatgatttcaggagccttaacagatcaagaagtccgcacggcacgtatagaagaa
ctgaagatgcttttctcttga

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