Setaria viridis (green foxtail): 117852963
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Entry
117852963 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K04485
DNA repair protein RadA/Sms
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117852963
DNA repair and recombination proteins [BR:
svs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
117852963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ChlI
ATPase
DnaB_C
Lon_C
AAA
Zn_ribbon_LapB
AAA_22
AAA_16
SLFN-g3_helicase
RNA_helicase
NACHT
nSTAND3
AAA_14
AAA_18
zf-Tbcl_FmdE
Isochorismatase
DZR
Motif
Other DBs
NCBI-GeneID:
117852963
NCBI-ProteinID:
XP_034591176
LinkDB
All DBs
Position
4:complement(5565396..5574439)
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AA seq
659 aa
AA seq
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MPAPSAAMLRSPSSLRSLLRHSGRLLRPPNPPRLPRPLTPRLPSYPLSARPRFLSSSSST
SPAPGGAGWATYDPLTDTLSASAALPPPSASDSEPPPESEWGLFDPVAGRIVMQGSPPAS
SSTTAVPAAAAAEGEEEGEGAGESEGEEKGKVWASARVAKAQTKWSSVAAARKSPGKGGK
ERVSYACSNCGEAYSQWWGTCRYCNATGTVDKYVPGPDGDASAGGSQSQHVGRSWIPQKS
KEMVPQSLQEVNKGVNQASWRIPLSGSFGMEISRVLGGGIVPGSLILVGGDPGVGKSSLM
LQLASNILEGFKSDDSSPVVYVSGEESIEQIGNRADRMSIMSSKLYLYSGTDIEDILDKI
QPLSPRALIIDSIQTVYVRSFAGSAGNLSQVKECTSALLRFAKLTNIPVFLIGHVTKSGD
IAGPRLLEHIVDVVLYMEGERCSSHRLLRSVKNRFGSTDELGVFEMAEFGLQAVLNPSQM
FLTEHDSDSEILAGLAVAVILDGSRTFAIEVQALCVSGSLHSGQVVGIPSRRADVIISVL
MKQAGLKLQDNAIFLNVVSGFELAETAGDLAIAASICSSFLEFPIPNDVAFIGEIGLGGE
LRSVPRMDKRVMAIAKLGYKKCVVPKTSEKLLKPLKLDIEILPCSNLKQFINAIFRPQD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccccgtccgccgcgatgctccgctcgccctcctccctccgctccctgctccgc
cactccggccgcctcctccggcccccgaaccctcctcgtctcccacgccccctgactccc
cgcctccccagctacccgctctccgcacgcccccgcttcctctcctcctcctcctccacc
tcgcccgcccccggcggcgccgggtgggccacctacgacccgctcaccgacactctcagc
gcctccgcggcgctccctccgccctccgcctccgactccgagccccccccagagtccgag
tggggcctcttcgaccccgtcgcgggccgcatcgtcatgcagggctcccctcctgcttcc
tcgtccaccaccgcggttccggcggcggcggcggcggagggggaggaggagggggaaggt
gcgggagagagcgagggcgaggaaaaggggaaggtatgggcgagcgcgcgtgtcgcgaag
gcgcagaccaagtggtcgtcggtggcggcggcgcggaagtccccgggtaagggcggcaag
gagagggtctcgtacgcgtgcagcaactgcggggaggcctattcgcagtggtggggcact
tgccgctattgcaacgcgacggggaccgtggacaagtacgtcccggggcctgatggcgat
gcgtccgcgggggggtcgcagtcacaacacgtcggtcggtcgtggattcctcagaagagc
aaggagatggtgccgcagagccttcaggaggtgaacaagggggtcaatcaggcgtcgtgg
cgcatacccctgtcagggagctttggaatggagatctctcgagtgcttggtggtggcatt
gttcctggctccttgatattagtcggtggggatccaggtgttggcaaaagttcattgatg
ttacagcttgcttctaatatattggagggtttcaagtccgacgattcttctcctgttgta
tatgtgtctggtgaggagagtattgagcaaattggaaacagggctgatcggatgagtatc
atgtctagcaagttgtacctctactctggtacggatattgaggatatcttggacaaaatc
caaccgctgtctccaagggctctaattatcgattcaattcaaacagtttatgtcagatca
tttgctggaagtgctggcaatttatcacaggtcaaggaatgcacctctgccttgttacga
tttgcaaaactgaccaatatccctgttttcttgattggacatgttacaaaaagcggcgat
atcgctggtcctcgcctcttagagcacatagtggatgttgttctgtatatggagggagag
aggtgctcatcccatcgattgttgcggtcggttaagaatcgtttcggttcaacagatgag
cttggtgtatttgagatggccgaatttggtttgcaagctgtgctgaatcctagccagatg
ttcttaactgagcatgactctgattctgaaattctggccgggcttgctgtagctgttatt
ttagatggatctaggacctttgctatcgaagttcaggcattgtgtgtttctggttctctt
cactctggacaagtagttggcataccatcaagaagggctgatgtcataatctctgttctt
atgaagcaagcaggcctaaaacttcaggataatgctatttttttgaatgtcgtgagtggc
ttcgagttggctgagaccgcaggagatctggccatagcagcttcaatttgcagcagtttc
ttggagtttcctatcccaaatgatgttgcatttattggagagatcggccttggcggtgaa
cttagatctgtgccaagaatggacaagcgggtgatggctattgcaaagctgggatacaag
aagtgtgttgttcccaagacctctgagaagttgctcaaaccgcttaagcttgatattgag
atcttgccctgcagcaacctgaagcagttcataaacgccatatttaggccccaagattga
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