Setaria viridis (green foxtail): 117853042
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Entry
117853042 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase makorin
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117853042
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117853042
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117853042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-C3HC4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-RING_UBOX
zf-CCCH_9
zf-C3HC4_2
IBR_1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
117853042
NCBI-ProteinID:
XP_034591286
LinkDB
All DBs
Position
4:15500152..15506338
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AA seq
368 aa
AA seq
DB search
MSTNRVLCKFFMHGACLKGEYCEFSHDWKDQANNVCTFYQKGACSYGSRCRYDHVKVSRN
PTVPPPPPSSSTARLASTSRQLLSSSHLPHTGHQTDSSNQRNQISVDMLAHSTSKPAWSN
DFQHVVSEDEIDWSSNQTLQNQTKLKPSDLPICSFAAAGNCPYGEGCPQMHGDLCTTCGK
MCLHPYRSDEREEHIKLCAKNHKRLEALKRSQEIECSVCLDRVLSKPTAAERKFGLLSEC
DHPFCIACIRNWRSNSPASGMDVNSALRACPICRKLSYYVIPSVLWYFSKEEKEEITESY
KSKLKSIDCKYFDFGTGSCPFGTSCFYRHAYRDGRLEEVVLRHLDADDGSTVIAKNIRLS
DFLSRMHL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaatagggttctttgcaagttcttcatgcatggagcttgcttgaaaggagag
tactgtgagttctcccacgactggaaagaccaagcgaataacgtttgcacattctaccag
aaaggtgcatgctcatatggtagccgttgcagatatgaccatgtcaaagtttctcgtaac
cctacagtgccgccgccaccaccatcgtcaagtactgcaagacttgcatctacatctcgt
caacttttaagttccagtcatcttcctcacacaggacaccaaacagattcaagcaaccaa
agaaatcagatatctgtggatatgctggcacattctaccagtaagcctgcatggagtaat
gattttcaacatgttgtttcagaggatgaaattgactggtcctctaaccaaactttgcaa
aaccagacaaaattgaaaccttctgatctgcctatttgttcgtttgctgctgctggtaat
tgtccttatggggaagggtgccctcaaatgcatggagatctttgcacaacctgtggaaag
atgtgcttgcatccttatcgttctgatgagagggaggagcatatcaagttatgtgcgaaa
aatcacaaacgccttgaagctctgaaacgcagccaagagatagaatgcagtgtctgtttg
gatcgtgtgctatcaaagcctactgctgctgaaagaaagtttggactgctatctgaatgt
gatcatcctttctgtatcgcatgcattagaaattggcgtagcaattctcctgcctctggt
atggatgtgaactcagcactgagggcttgtccaatatgtcgcaaactttcgtactatgtc
attccaagtgttctttggtacttctcgaaggaagagaaagaggaaatcactgaaagctac
aaatccaagctcaagtctattgattgcaagtacttcgattttgggactggctcatgcccc
tttggtacaagttgtttctacaggcatgcctacagagatggacgcttggaagaggttgta
ctgcggcatcttgatgctgatgacggaagtacagtaattgcaaaaaatatcaggttgtcg
gacttcctcagtcggatgcatctttag
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