Setaria viridis (green foxtail): 117853081
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Entry
117853081 CDS
T07951
Name
(RefSeq) solanesyl-diphosphate synthase 1, mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00900
Terpenoid backbone biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117853081
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
svs01006
]
117853081
Enzymes [BR:
svs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117853081
Prenyltransferases [BR:
svs01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117853081
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GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
HrpJ
Motif
Other DBs
NCBI-GeneID:
117853081
NCBI-ProteinID:
XP_034591337
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Position
4:37778040..37783215
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AA seq
429 aa
AA seq
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MSWRWALARRAAALAAGTGAGCAAQAQRLLTTSSGAGAALLGRQHLPLASQIRSKVVGYR
GAAFMSSRWLHDAQYQVRQDGDSRAQEHRDPFELVADDLSLVADRLRSMVAAEVPKLASA
AEYFFKVGAEGKKFRPTVLLLMASALRFPLSESTEGGVLSMLADKLRTPHLNIAEITEMI
HVASLLHDDVLDDADTRRGVSSLNLVMGNKLSVLAGDFLLSRACVALAALGNTEVVSLMA
TAVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAVAILAGHTAEVSMLA
YEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILYAMEEFPQLHEVVDS
GFEDPANVELALDYLQKSRGIERTKELAREHANRAIKAVEALPDSDDEDVLTSRRALIDI
TERVITRTK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggcggtgggctctcgcgcgccgcgctgccgcgctggccgccgggaccggtgcc
ggctgcgcggcccaggcgcagaggctcctgacgacctcgtccggcgcgggcgccgccctc
ctcgggcggcagcacctgcccctcgcctcccagattcggagcaaggtggtgggttacaga
ggagctgctttcatgagctccagatggctacatgatgctcagtaccaggttcgccaggac
ggggattcaagggctcaggaacacagagatccatttgaattagtcgccgatgatctatca
cttgttgcagataggttacgatccatggtggctgctgaggtccccaaactggcatcagca
gctgaatactttttcaaggtgggagctgaagggaaaaaattccgacctacggttttgttg
ctgatggcatcagctctcagattccccctatcagaatcaacagaaggcggagttctcagt
atgttagcagataaactccgcacaccccatctgaacattgcagagataacagagatgatt
catgtcgcaagccttctgcatgatgatgttctagatgatgctgatactaggcgtggtgtc
agttcgttgaatcttgttatggggaacaagctttctgtactggcaggtgacttcctcctg
tctagagcatgtgtggcacttgcagcacttgggaatacagaggtggtatccctaatggca
actgctgtagaacatctagttaccggtgaaactatgcagatctcaacaagcagagagcaa
cgacgaagcatggaatactacttgcagaagacgtactacaaaacagcatcactgatatca
aatagctgcaaggctgttgctattcttgcagggcacactgctgaggtctcgatgcttgca
tacgaatatggacgaaacttgggtttagcgttccagttgattgatgatgttctagatttc
actggcacctctgcatcccttgggaagggttcattatctgatattcgccatggaatcatt
acggccccaattctatatgcaatggaggaattccctcaactacatgaagttgttgacagc
ggcttcgaggatcctgcaaatgttgaacttgcccttgactatctccagaagagccgtgga
attgaaaggacgaaagagctagcacgggaacacgctaaccgtgcaatcaaagctgtagaa
gccctcccagacagcgacgacgaggatgttctgacttcgaggcgcgctcttattgatata
acagagagagtcatcaccaggacaaaatag
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