Setaria viridis (green foxtail): 117853168
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Entry
117853168 CDS
T07951
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117853168
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
117853168
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Structural polysaccharide
117853168
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
117853168
NCBI-ProteinID:
XP_034591430
LinkDB
All DBs
Position
4:complement(12670870..12675181)
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AA seq
508 aa
AA seq
DB search
MGWKVASGGKAAAAASEKLRFPPSSAAARSRMKLWVVRATTTVLLWTCVVQLTAVGDNWG
PRVLKGWPSCLTAPEEEAAALPGAAFAARPQPVVEKAALPPKRIYRNNGYLMVSCNGGLN
QMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVEHFITSLRGEVRILREL
PPRVKRRVELGMFHSMPPISWSDISYYQNQILPLIRKYKVLHLNRTDARLANNGLPIDIQ
KLRCRVNYASLRFTPQIEELGKRVIRILRQNGPFLVLHLRYEMDMLAFSGCTQGCSNEEA
EELTRMRYAYPWWKEKVIDSDLKRKDGLCPLTPEETALVLRALDIDRSMQIYIAAGEIYG
GKRRMAALTSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMA
KVVEGHRRFMGFKKTVLLDRKLIVELVDRYTNGSLQWDEFSSLIKAAHAKRMGSASKRTV
IPDRPKEEDYFYANPQECLQDRDLLQTS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggggtggaaggtggcgtcagggggtaaggcggcggcggcggccagcgagaagctcagg
ttccctccctcctccgccgccgcgcgctcgcggatgaagctctgggtcgtgcgcgccacc
accacggtgctgctctggacctgcgtcgtgcagctcaccgccgtcggcgacaactggggc
ccgcgggtgctcaagggctggccgtcctgcctcaccgcgcccgaggaggaggccgcggcg
ctccccggcgccgccttcgccgcgcgcccgcagcccgtcgtcgagaaggccgcgctgccg
cccaagagaatatataggaacaatggttatttgatggtttcgtgcaatggtgggcttaac
caaatgcgagctgcaatatgtgacatggtcgtaattgcaagatatttgaatgtaacttta
gttgttccagagttagataagacttcattttggaatgatccaagcgagttccaagacata
tttgatgtcgagcactttataacctcattacgaggtgaagtccgcattctgagagaattg
cccccgagggtaaagagaagggttgaacttggaatgtttcactccatgccaccaattagt
tggtctgatatttcctattatcaaaatcagattcttcctttgattcgcaagtacaaggtt
ctccatctgaatagaactgatgccaggctagcaaacaatggtttaccaattgacatccag
aaactgcgatgccgagtaaattatgcctctctcagatttacccctcaaattgaagagttg
ggcaagcgagtaattagaatacttcgccaaaatggccctttcttggtccttcatttacgt
tatgaaatggatatgctggcattctctggctgtacacaaggttgcagtaatgaagaggca
gaagagcttacaagaatgaggtatgcttatccatggtggaaagagaaagtgattgactca
gacttaaaaagaaaagatggcctttgcccgttgacacctgaggagactgctcttgtcctc
agagcattggacatcgatagaagtatgcaaatatacattgctgctggagaaatatatggt
ggaaagcgcaggatggctgctctaacttcagcatacccgaatgtggtgaggaaggagaca
cttttggaaccttctgatctgatgttcttccagaaccattcatcacaaatggctgcacta
gattacttggtatctttagaaagtgatatatttgttccaacatatgatggcaatatggct
aaagtcgttgagggtcatcggagattcatgggtttcaagaagacagtcttgttagaccga
aaacttattgttgagctagtggaccggtacaccaatggttctctgcaatgggatgagttc
tcttcattgatcaaggctgcccatgcaaagcggatgggttcagcttcaaagaggacggtg
attcccgacagacccaaggaagaggattacttctatgccaatccccaagaatgcctccaa
gatcgtgatcttctacaaacatcatga
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