Setaria viridis (green foxtail): 117853300
Help
Entry
117853300 CDS
T07951
Name
(RefSeq) transketolase, chloroplastic isoform X1
KO
K00615
transketolase [EC:
2.2.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00030
Pentose phosphate pathway
svs00710
Carbon fixation by Calvin cycle
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
svs01230
Biosynthesis of amino acids
Module
svs_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
svs_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
svs_M00165
Reductive pentose phosphate cycle (Calvin cycle)
svs_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
117853300
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
117853300
09109 Metabolism of terpenoids and polyketides
01051 Biosynthesis of ansamycins
117853300
Enzymes [BR:
svs01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.1 transketolase
117853300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transketolase_N
Transket_pyr
Transketolase_C_1
Transketolase_C
E1_dh
Motif
Other DBs
NCBI-GeneID:
117853300
NCBI-ProteinID:
XP_034591585
LinkDB
All DBs
Position
4:complement(1680239..1684148)
Genome browser
AA seq
776 aa
AA seq
DB search
MKAANSWNSEEKVRRRARHLPPLCSVAHAHKPSHYNMAVHSIAGAYTTIGAHSSSVPCGR
APAEHIGLRHLSALSSCSLRSPLFSHCSPVSSPSSKCAVHAIAIETPERNAASGQLLEKC
VNTIRFLAIDAVENAKSGHAGMPMGCAALGHILYDEVMRYNPKNPYWFNRDRFVLSAGHG
CLLQYALLYLAGYDSISEHELKQLRQWGSRTPGHPESFLTPGVEVTTGPLGQGIANAVGL
ALAEKHLAARFNKPGSEIVDHYTYVILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNH
ISVDGDTGIAFTEDVSARFEALGWHTIWVKNGNTGYDDIREAIKQAKAVTDRPTLIKVTT
TIGFGSPNKANSYSAHGGPLGTKEVEATRHNLGWPYEPFVVPQDVKSHWSHHVPQGDALE
ADWNAKFAEYEKKYPEDAAILKIIISGELPADWVDVLPKYTQASPADATRNLSQQCLNAL
AKVLPGLFGGSADLASSNMTLLKMFGDFQRDTPEERNVRFGVREHGMGAICNAIALHSPG
LIPYCATDVVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGADGPTHQPIEHLMNFRTMP
NILMLRPADGNETSGAYKVAVLNMKRPSVLALSRQKLPHLPGTSVEGVEKGGYIISDNST
GNKPDLIMLSTGSELQIAVKAADELSREGKTVRVVSLVCWELFEEQSDEYKESVLPESVT
ARISIEAGCTLGWQKYVGTKGKIIGIDRFGASAPGEKIFEEYGITVGSVITAARSL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggcgaactcgtggaacagcgaggagaaagtgcggaggagagctcgtcatctc
ccacctctgtgctcagttgctcacgcacacaaaccatctcattacaacatggccgtgcac
tccatcgctggcgcatataccaccattggtgcacactccagctccgtaccctgtggcaga
gcacccgcggagcacattgggctccgccacctcagcgcactttcaagctgcagcctgcgc
tccccgctcttttcccactgctcacccgtgtcctccccgagcagcaagtgtgctgtgcat
gccatcgccattgagacgcccgagcggaatgctgcctctggtcaactactcgagaagtgt
gtgaacacgatacggttcctggccatcgacgccgtggagaatgccaaatccggtcatgca
ggaatgcccatggggtgcgcggccttgggtcacattctctatgatgaggtgatgcggtat
aaccccaagaacccctactggtttaaccgagaccgtttcgttctctctgctggccatggg
tgcttgcttcagtatgcccttctctacctagctggctatgacagcatcagtgaacatgaa
ttgaagcaactcaggcaatggggaagcaggactccaggccatcctgaaagctttcttact
cctggagttgaagttaccactggaccacttggtcagggaatcgccaatgcagttgggctg
gcacttgcggagaagcacctggctgcccgcttcaacaagcctggaagtgagatcgtcgat
cactacacgtatgttattctgggagatggttgccaaatggagggtatctccaatgaagct
tgctcgttggctggacactggggtcttggcaagctgattgctttctatgatgacaatcac
atatctgttgatggagatacaggtattgcattcacagaggacgtaagcgcccgctttgag
gctctcggatggcacacgatatgggttaagaatggaaacactggctatgatgacatccgt
gaagccattaagcaagctaaggcagtaactgacaggcctacactaatcaaagtgacaact
acaattggtttcggatctcctaacaaggcgaactcatacagtgcacatggaggtccattg
ggcaccaaagaggttgaagcaacaaggcacaaccttggatggccctatgagccattcgtt
gtgccccaggatgtcaagagccattggagccaccatgtgccacaaggtgatgcgcttgag
gctgattggaatgctaagttcgctgagtatgaaaagaagtatccagaggatgcagcaatt
cttaaaattatcatctcgggggagctgccggctgattgggttgatgttcttcctaaatac
actcaggcaagcccagcagatgccaccaggaatctctctcagcagtgcttgaatgcactt
gctaaagtattgcctggtctttttggaggtagtgctgatcttgcgtcctccaacatgaca
ctacttaaaatgtttggcgacttccagagggatacacctgaggagcgcaatgtccgtttt
ggagtcagggagcatggaatgggtgccatttgcaacgccattgctctgcacagtccaggt
ctcattccttattgcgctactgatgttgttttcactgattacatgagaggtgccatgagg
atctcagctttgtctgaagctggagttatctatgtcatgacccatgactcaattggtctt
ggagcagatggaccgacccatcagcccattgagcatttgatgaacttccgaacaatgccc
aacatattgatgctccgtcctgcggatggcaatgagacttctggggcttacaaagtcgca
gtcctcaacatgaagaggccatctgttctcgccctctccaggcaaaagcttcctcacctg
cctggtacctcggttgagggtgttgagaagggtgggtacatcatctccgacaactcaact
gggaacaaacctgacctcattatgttgagtaccggttctgaattgcagattgctgtcaag
gctgccgatgagttaagcagggaggggaagactgttcgtgttgtgtcacttgtttgctgg
gaactttttgaggaacagtcggatgaatacaaggagagtgttctcccggagtcggttact
gcaagaattagtattgaagcaggttgtactcttggatggcagaaatacgtcgggaccaag
ggaaagattattgggatcgacagattcggtgcgagtgctcctggtgaaaagatcttcgag
gagtatggtatcaccgtggggagtgtcatcacagctgccaggagcttgtga
DBGET
integrated database retrieval system
