Setaria viridis (green foxtail): 117853373
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Entry
117853373 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117853373
04121 Ubiquitin system [BR:
svs04121
]
117853373
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117853373
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117853373
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117853373
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
Rad50_zn_hook
FAR1_N
zf-C3HC4_3
zf-RING_5
zf-RING-like
Zn_ribbon_6
zf-Nse
Prok-RING_1
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
117853373
NCBI-ProteinID:
XP_034591644
LinkDB
All DBs
Position
4:6642029..6643419
Genome browser
AA seq
313 aa
AA seq
DB search
MSTGASGGVRRRRRTWRLYWCYVCGRAVRAVSYPTSDVFCPRCFGRFLHEIDLPAPRPVL
PSPDQFFQPPFLPHDGPRRWVIYTGDPTADADAPLPRRRRRRVPSPPPAPATWRPDDDAP
PPPPPPMVDWDELIGTNLDALIERLTQDDRPGPAPAPESAIESLPTVRVSPAHLSDGSQC
PVCKEEFELGEAARELPCKHAYHTDCIVPWLRLHNSCPVCRQELPAEQADGSREGGGEEG
SGETTGAAPPGPVVMAGWGPLAWLASARGPDGDAWERSEADDGDAAGGGTCAAAVMQSFV
VVAACFFALSFFV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgggcgctagcggcggcgtgcgccggcgccggcggacatggcgcctgtactgg
tgctacgtgtgcggccgcgcggtgcgcgccgtgtcgtacccgacctcggacgtcttctgc
ccgcgttgcttcggccgcttcctccacgagatcgacctgccggcgccgcggcccgtactc
ccgtcgcccgaccagttcttccagccgccgttcctcccgcacgacgggccccgccggtgg
gtcatctacaccggggaccccacggccgacgctgacgcgccgctcccccgccgccgccgg
cggcgcgtcccgtccccgccgccggccccggcgacgtggcgcccggacgacgacgcgcca
ccgccgccaccgccacccatggtcgactgggacgagctcatcgggacgaacctggacgcc
ctcatcgagcgcctcacccaggacgaccgccccgggccggcgcccgcgccggagtcggcc
atcgagtcgctccccacggtgcgggtctccccggcgcacctgtccgacggctcgcagtgc
cccgtgtgcaaggaggagttcgagctcggggaggccgcgcgggagctgccgtgcaagcac
gcgtaccacaccgactgcatcgtgccgtggctccggctccacaactcgtgcccggtctgc
cggcaggagctgccggctgagcaggcggatggatcacgggagggcggcggggaggaaggc
agtggcgagacgaccggggcggcgccgccggggccggtggtgatggccggatgggggccg
ctggcttggctggcatcggcacgcgggccggacggggacgcttgggagaggagtgaagcg
gatgacggtgacgccgccggaggtggtacttgtgcggcggctgtcatgcagtcttttgtc
gttgtcgctgcttgctttttcgcgctctcgttctttgtttga
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