KEGG   Setaria viridis (green foxtail): 117854064
Entry
117854064         CDS       T07951                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03083  Polycomb repressive complex
svs04120  Ubiquitin mediated proteolysis
svs04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117854064
   04120 Ubiquitin mediated proteolysis
    117854064
  09126 Chromosome
   03083 Polycomb repressive complex
    117854064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svs04131]
    117854064
   04121 Ubiquitin system [BR:svs04121]
    117854064
   03036 Chromosome and associated proteins [BR:svs03036]
    117854064
Membrane trafficking [BR:svs04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    117854064
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     117854064
   Cul7 complex
     117854064
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     117854064
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     117854064
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 117854064
NCBI-ProteinID: XP_034592233
LinkDB
Position
4:complement(30236943..30237670)
AA seq 171 aa
MASPTMFTLISCDDERFEVTEAAANMSQTIRHMIEDGCADGGVPLPNVDAKTLAKVLEYC
NRHAAAAAASPEPAAAGPAATASASAGKDDDDDLASFDKAFVDVDKDTLYNLLLASNYLE
VKGLLDLTCQKVADMIKGKVPDQIRQTFGIKNDFSPEEYEEIRKEYSWAFE
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcttccccgacgatgttcacgctcatcagctgcgacgacgagcgcttcgaggtgacg
gaggcggcggccaacatgtcgcagaccatccgccacatgatcgaggacggctgcgccgac
ggcggcgtcccgctccccaacgtcgacgccaagaccctcgccaaggtgctcgagtactgc
aacaggcacgccgccgccgccgccgcgagccccgagcctgctgctgccggccccgccgcc
accgcgagcgcctcggcgggcaaggacgacgacgacgatctggcgagcttcgacaaggcg
ttcgtggacgtcgacaaggacacgctgtacaacctcctgctggcctccaactacctcgag
gtcaaggggttgctggacctcacctgccagaaggtcgccgacatgatcaagggcaaggtg
ccggaccagatcaggcagacgttcgggatcaagaacgacttctcgcccgaggagtacgag
gagatccgcaaggagtactcatgggctttcgagtag

DBGET integrated database retrieval system