Setaria viridis (green foxtail): 117854105
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Entry
117854105 CDS
T07951
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00040
Pentose and glucuronate interconversions
svs01100
Metabolic pathways
Module
svs_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117854105
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
117854105
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117854105
NCBI-ProteinID:
XP_072149364
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Position
4:complement(33555725..33557612)
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AA seq
449 aa
AA seq
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MASPFQRRPEAMASRSCALLLVLAMATTWLAADAGAGAGPVFNVTDFGAVADGKTDSSRA
FLRAWMRACATPGRPAVVVPRGGSYLLHPLVLRGPCRGYMEVRVAGVLRAPPGLGAFRGC
REWVHFSGVDGLLVTGGGTFDGRGATAWPLNECPKKRDCKLLPTVNKLRLICTHFGRSIG
RSTVQIDLHDEIKNLLVQSIKLGRVTNATITGVTSLDSKFFHVTVAGSHGVRIHGVTIRA
PRDSPNTDGVHIQGSSDVRVTDCAVATGDDCVSVGPGASDVVVSGVTCGPGHGISVGSLG
RYPGEEDVRRLRVVNCTIAGTSNGVRIKTWRGGSRPTSVSGLVFEDIVMRKVRNPIIIDQ
EYCPYASCRESEQRPSAVRISDVKFRNIRGVSATQVAVKLSCSEASPCRGLELRDIDLRY
FKRGVSTQSQCAHVAGGVVGGTLVPPSCI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcccttccagcggcgcccggaagccatggcgtcgcgctcgtgcgctctgctt
ctcgtccttgccatggcgacgacgtggctcgccgcagacgccggtgccggcgccggcccg
gtcttcaacgtcacggacttcggcgcggtcgcggacgggaagacggacagctccagggcg
ttcctgagggcgtggatgagggcgtgcgcgacgccagggaggcccgccgtcgtcgtcccc
aggggcgggagctacctcctgcaccccctcgtgctccgcggcccgtgcaggggctacatg
gaggtccgcgtcgccggcgtcctccgcgcgccgcccgggctcggcgccttccgcggctgc
cgcgagtgggtccacttctctggcgtcgacgggctcctcgtcaccggcggcggcacgttc
gacggccgcggcgccaccgcgtggccgctcaacgagtgccccaagaaacgcgactgcaag
ctcctccccaccgtaaataagctcaggctgatttgcacgcattttggccgttcgatcgga
agatcgacggtccagattgatttgcatgatgagataaaaaatttgctggtgcagtccatc
aagctggggcgggtgacgaacgcgacgatcacaggggtgacgtcgctggacagcaagttc
ttccacgtgacggtggccggcagccacggcgtgcggattcacggcgtcaccatccgggcg
ccgcgcgacagccccaacacggacggcgtgcacatccagggctcctccgacgtgcgcgtc
accgactgcgcggtggcgacgggcgacgactgcgtctccgtcgggcccggcgcctccgac
gtggtggtgtccggcgtcacctgcggccccgggcacggcatcagcgtcggcagcctcggc
aggtaccccggcgaggaggacgtccggcggctgcgcgtcgtcaactgcaccatcgccggc
acctccaacggcgtgcgcatcaagacgtggcgcggcggctcgcgccccacctccgtgtcc
gggctcgtcttcgaggacatcgtcatgcggaaggtccgcaaccccatcatcatcgaccag
gagtactgcccctacgcctcctgccgcgaatcggagcagcggccgtcggcggtgaggata
agcgacgtcaagttcaggaacatccggggcgtgtcggcgacgcaggtggcggtgaagctg
tcgtgcagcgaggcgagcccgtgccgcgggctggagctcagggacatcgacctccgctac
ttcaagcgcggggtctccacccagtcgcagtgcgcgcacgtcgccggcggcgtggtcggc
ggcacgctcgtccctccttcctgcatatga
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