Setaria viridis (green foxtail): 117854124
Help
Entry
117854124 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K17302
coatomer subunit beta'
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117854124
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117854124
Membrane trafficking [BR:
svs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117854124
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117854124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Beta-prop_EML_2
WD40_Prp19
Beta-prop_EML
Beta-prop_TEP1_C
WD40_CDC20-Fz
WD40
WDR55
Cep192_D6
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Motile_Sperm
Beta-prop_RIG_2nd
Ig_CFAP65_4th
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
117854124
NCBI-ProteinID:
XP_034592307
LinkDB
All DBs
Position
4:complement(10077233..10118580)
Genome browser
AA seq
866 aa
AA seq
DB search
MHSGASTFDDYRKQLQIVLQDPSEEPVPLSLDYLKAITDGFSSDRLVGRGGFGEVYRGVL
GREKFIAIKKLYAEHVVDDSKYKAEFNSLMRIRHPNIVQLIGYCAETKFEAMPQNGEHIL
AEVRQRLLCFEYISNGSLRDYVLDLDLGWDKRYAIMEGICKGLDFLHEECNITHMDLKPE
NILLDDHMVPKITDFGLSRLRDAGKSQIFTHNLTGTLGYMPPEYLLEGKISHKTDIYSLG
VIMCEIITGEKVPIGGSSNSSMSMEFTRRACGRWMKIFEKSLNDASLLELYIKQVKLLLD
IALKCVDHDRTKRPCSSEILKVFYPNPAEISSCELNSNYGQVIELLSVHPLQLDFSLPEP
KKLHHSSCSLHLTNNIDAPVVFRLLPSETLSAHFLPQSGVVPPKCQYTLAVVMLHQQNPR
FGNDDFFTLESTKERYQGLRIVDPGALITKARERGLKVHEVKIAAVCAHTDPPIGPNLKP
ELARPVSWDRQDVTPELMIMPAERYPFGFGEQPAAAICVHLTEPWILRACFLDAFEVWDY
HRMEKMHFCFAQPQKVNWIPRDEADIYGDADGQLSLPPGLPKFISRKRWILVGSTTEVSR
RDLGYIYVYSYMAVKNFKGSKTYILSKIKSFKAHERGTVLLEVHPSRPYVLSSLVPVNGS
SGNVPMHVIKLWDWESGWDCVQTFNMEDFARELKFSPKDQDTFVTISQEKDVKVWDIDSR
KCKSTLPVTDEVSCFDFFTQGGKPYLIIVHRNESKSTIWDYDTGTLVETLKEKNISTACS
HPELPVLITGSEDGRVSLWSSSTFNLVGVLNCYLGKVITVSGVKGTERIVIEHQHGIAVV
GIGHMLESERPHGSEGEASLGIDKDT
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtggagcttctacctttgatgactacaggaagcagctacagattgtactgcag
gatcctagtgaagaacccgtgcctctgtcactggattatttgaaagccatcacagatggt
ttttcttctgatcgactagttggcaggggtgggtttggagaggtttacaggggagttctc
gggagggagaagtttattgctatcaagaaactttatgctgaacatgtggttgatgacagc
aaatacaaagctgagttcaattctctaatgaggatacggcacccaaatatagtgcaactt
attggttactgtgccgagacaaagtttgaagcgatgccgcaaaacggggaacatattctt
gcagaagtacgtcaacgtttgctctgtttcgagtacataagcaacggaagtcttcgtgac
tatgttctagatctggatcttggctgggataagagatatgcaataatggaaggaatttgc
aaaggtttagatttccttcacgaggaatgcaatattacccatatggatcttaaacctgaa
aatatactgctggatgaccatatggttccaaaaattacggattttggtttgtcgaggctc
agggatgcaggaaaatctcaaatttttactcacaaccttacgggaacacttggatacatg
ccaccagaatacctactcgagggcaaaatatctcataagacagatatatacagtttgggt
gttataatgtgtgagataatcacaggcgaaaaggtgcccattggcgggagtagtaacagc
tccatgagtatggaattcacacggagagcttgcggaagatggatgaaaatatttgagaag
tcactgaatgatgcgtcactactggaactatatatcaaacaagtaaaactactgctcgac
atagccctaaaatgtgtggaccatgacaggacgaaaaggccttgttcatcggaaatactt
aaggttttttaccctaatccagcggaaataagctcgtgtgaattaaacagcaactatgga
caggtcatcgaactcctcagtgtgcatccgctgcagcttgatttctctttgcctgagccc
aaaaagttacatcacagctcatgctcgctgcacctaaccaacaacatagatgcacctgtg
gtcttcaggctcttgccatcagagactctatcagcacatttcttgccgcaatctggtgtg
gtgccgccgaagtgccagtacacactcgctgtcgtaatgcttcaccagcaaaatccacgg
ttcggcaacgacgactttttcactctcgaaagcaccaaagagaggtatcagggcctacgg
atcgtcgacccaggagcattgattacgaaagccagagaaaggggtcttaaggtgcacgag
gtgaaaatagctgctgtctgtgcacatactgatccgccgataggtcctaatttaaaacca
gagttggcccgaccagtttcctgggaccgacaagacgtaacgcctgaactcatgataatg
cccgcggaaaggtatccttttggtttcggggagcaaccggcagcagccatatgtgtgcat
ctaacagagccatggatcctgagggcatgctttttggatgcattcgaggtatgggactac
cataggatggaaaagatgcacttctgttttgcccaaccgcaaaaagtcaactggattccc
agggatgaggccgatatatatggcgatgcagatgggcaactaagcctaccaccagggcta
ccaaagtttatttcacgaaagagatggattttggttgggtctaccactgaagttagcaga
cgagatcttggttacatatatgtgtacagttatatggcagtgaaaaatttcaagggatcc
aaaacatatatattatcaaaaataaagagttttaaggcccatgaaagaggtactgtgtta
ttggaagtccatccatctcgaccgtatgtgctgtcatcattagttcctgttaatggatcc
agtgggaatgtaccaatgcacgtcattaagctgtgggactgggagagtggctgggattgt
gttcagacatttaacatggaagactttgcacgagaacttaaatttagcccaaaggaccaa
gatacttttgttacaatttcccaagagaaagatgtaaaggtatgggatattgattctcga
aaatgtaaatctacgttgcccgtgacagacgaagtatcgtgttttgatttctttactcaa
ggtggaaagccatacttgatcatagttcatcgcaatgaatctaagtccacgatatgggac
tacgatacagggactcttgttgaaactctgaaagagaagaatatatctactgcttgttcc
catcctgaacttccggtactaattacaggctccgaagacggaagagtctccctatggagc
tccagtacgttcaatcttgtgggcgtactgaactgttatcttggaaaggtaattactgta
tccggcgtgaagggaacagaaaggattgtaatagaacatcaacatggaattgcagttgtt
ggaattggccatatgctagaaagtgaaagaccacatgggtcagagggagaagcgagcttg
gggatagataaagatacataa
DBGET
integrated database retrieval system
